Class-Aware Image Search for Interpretable Cancer Identification

In recent times, the performance of computer-aided diagnosis systems in classification of malignancies has significantly improved. Search and retrieval methods are specifically important as they assist physicians in making the right diagnosis in medical imaging owing to their ability of obtaining si...

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Main Authors: Arash Ebrahimian, Hossein Mohammadi, Morteza Babaie, Nima Maftoon, H. R. Tizhoosh
Format: Article
Language:English
Published: IEEE 2020-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/9238034/
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spelling doaj-e0b2280d974c419cbf492743936f65eb2021-03-30T04:17:22ZengIEEEIEEE Access2169-35362020-01-01819735219736210.1109/ACCESS.2020.30334929238034Class-Aware Image Search for Interpretable Cancer IdentificationArash Ebrahimian0https://orcid.org/0000-0003-4571-9177Hossein Mohammadi1Morteza Babaie2https://orcid.org/0000-0002-6916-5941Nima Maftoon3H. R. Tizhoosh4https://orcid.org/0000-0001-5488-601XDepartment of Systems Design Engineering, University of Waterloo, Waterloo, ON, CanadaDepartment of Systems Design Engineering, University of Waterloo, Waterloo, ON, CanadaKimia Laboratory, University of Waterloo, Waterloo, ON, CanadaDepartment of Systems Design Engineering, University of Waterloo, Waterloo, ON, CanadaKimia Laboratory, University of Waterloo, Waterloo, ON, CanadaIn recent times, the performance of computer-aided diagnosis systems in classification of malignancies has significantly improved. Search and retrieval methods are specifically important as they assist physicians in making the right diagnosis in medical imaging owing to their ability of obtaining similar cases for a query image. Supervised classification algorithms are generally more accurate than unsupervised search-based classifications; however, the latter may more easily provide insights into the decision-making process by providing a group of similar cases and their corresponding metadata (i.e., diagnostic reports) and not simply a class probability. In this study, we propose a class-aware search operating on deep image embeddings to increase the accuracy of content-based search. We validate our methodology using two different publicly available datasets, one containing endometrial cancer images and the other containing colorectal cancer images. The proposed class-aware scenarios can enhance the accuracy of the search-based classifier, thereby making them more feasible in practice. With search results providing access to the metadata of retrieved cases (i.e., pathology reports of evidently diagnosed cases), such a combination has clear benefits for assisting experts with explainable results.https://ieeexplore.ieee.org/document/9238034/Medical image searchmedical image classificationdeep learningpathology whole-slide images
collection DOAJ
language English
format Article
sources DOAJ
author Arash Ebrahimian
Hossein Mohammadi
Morteza Babaie
Nima Maftoon
H. R. Tizhoosh
spellingShingle Arash Ebrahimian
Hossein Mohammadi
Morteza Babaie
Nima Maftoon
H. R. Tizhoosh
Class-Aware Image Search for Interpretable Cancer Identification
IEEE Access
Medical image search
medical image classification
deep learning
pathology whole-slide images
author_facet Arash Ebrahimian
Hossein Mohammadi
Morteza Babaie
Nima Maftoon
H. R. Tizhoosh
author_sort Arash Ebrahimian
title Class-Aware Image Search for Interpretable Cancer Identification
title_short Class-Aware Image Search for Interpretable Cancer Identification
title_full Class-Aware Image Search for Interpretable Cancer Identification
title_fullStr Class-Aware Image Search for Interpretable Cancer Identification
title_full_unstemmed Class-Aware Image Search for Interpretable Cancer Identification
title_sort class-aware image search for interpretable cancer identification
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2020-01-01
description In recent times, the performance of computer-aided diagnosis systems in classification of malignancies has significantly improved. Search and retrieval methods are specifically important as they assist physicians in making the right diagnosis in medical imaging owing to their ability of obtaining similar cases for a query image. Supervised classification algorithms are generally more accurate than unsupervised search-based classifications; however, the latter may more easily provide insights into the decision-making process by providing a group of similar cases and their corresponding metadata (i.e., diagnostic reports) and not simply a class probability. In this study, we propose a class-aware search operating on deep image embeddings to increase the accuracy of content-based search. We validate our methodology using two different publicly available datasets, one containing endometrial cancer images and the other containing colorectal cancer images. The proposed class-aware scenarios can enhance the accuracy of the search-based classifier, thereby making them more feasible in practice. With search results providing access to the metadata of retrieved cases (i.e., pathology reports of evidently diagnosed cases), such a combination has clear benefits for assisting experts with explainable results.
topic Medical image search
medical image classification
deep learning
pathology whole-slide images
url https://ieeexplore.ieee.org/document/9238034/
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AT mortezababaie classawareimagesearchforinterpretablecanceridentification
AT nimamaftoon classawareimagesearchforinterpretablecanceridentification
AT hrtizhoosh classawareimagesearchforinterpretablecanceridentification
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