Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30

Abstract Background Major cost of bioethanol is attributed to enzymes employed in biomass hydrolysis. Biomass hydrolyzing enzymes are predominantly produced from the hyper-cellulolytic mutant filamentous fungus Trichoderma reesei RUT-C30. Several decades of research have failed to provide an industr...

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Main Authors: AthiraRaj Sreeja-Raju, Meera Christopher, Prajeesh Kooloth-Valappil, Rajasree Kuni-Parambil, Digambar Vittal Gokhale, Meena Sankar, Amith Abraham, Ashok Pandey, Rajeev K. Sukumaran
Format: Article
Language:English
Published: BMC 2020-12-01
Series:Biotechnology for Biofuels
Subjects:
Online Access:https://doi.org/10.1186/s13068-020-01830-9
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spelling doaj-e0257fdfe6e743c2a400a6d3f247849b2020-12-06T12:53:09ZengBMCBiotechnology for Biofuels1754-68342020-12-0113111510.1186/s13068-020-01830-9Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30AthiraRaj Sreeja-Raju0Meera Christopher1Prajeesh Kooloth-Valappil2Rajasree Kuni-Parambil3Digambar Vittal Gokhale4Meena Sankar5Amith Abraham6Ashok Pandey7Rajeev K. Sukumaran8Biofuels and Biorefineries Section, Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and TechnologyBiofuels and Biorefineries Section, Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and TechnologyBiofuels and Biorefineries Section, Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and TechnologyDepartment of Microbiology and Cell Biology, Indian Institute of ScienceNational Chemical LaboratoryBiofuels and Biorefineries Section, Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and TechnologyDepartment of Chemical Engineering, Hanyang UniversityCentre for Innovation and Translational Research, CSIR-Indian Institute of Toxicology ResearchBiofuels and Biorefineries Section, Microbial Processes and Technology Division, CSIR-National Institute for Interdisciplinary Science and TechnologyAbstract Background Major cost of bioethanol is attributed to enzymes employed in biomass hydrolysis. Biomass hydrolyzing enzymes are predominantly produced from the hyper-cellulolytic mutant filamentous fungus Trichoderma reesei RUT-C30. Several decades of research have failed to provide an industrial grade organism other than T. reesei, capable of producing higher titers of an effective synergistic biomass hydrolyzing enzyme cocktail. Penicillium janthinellum NCIM1366 was reported as a cellulase hyper producer and a potential alternative to T. reesei, but a comparison of their hydrolytic performance was seldom attempted. Results Hydrolysis of acid or alkali-pretreated rice straw using cellulase enzyme preparations from P. janthinellum and T. reesei indicated 37 and 43% higher glucose release, respectively, with P. janthinellum enzymes. A comparison of these fungi with respect to their secreted enzymes indicated that the crude enzyme preparation from P. janthinellum showed 28% higher overall cellulase activity. It also had an exceptional tenfold higher beta-glucosidase activity compared to that of T. reesei, leading to a lower cellobiose accumulation and thus alleviating the feedback inhibition. P. janthinellum secreted more number of proteins to the extracellular medium whose total concentration was 1.8-fold higher than T. reesei. Secretome analyses of the two fungi revealed higher number of CAZymes and a higher relative abundance of cellulases upon cellulose induction in the fungus. Conclusions The results revealed the ability of P. janthinellum for efficient biomass degradation through hyper cellulase production, and it outperformed the established industrial cellulase producer T. reesei in the hydrolysis experiments. A higher level of induction, larger number of secreted CAZymes and a high relative proportion of BGL to cellulases indicate the possible reasons for its performance advantage in biomass hydrolysis.https://doi.org/10.1186/s13068-020-01830-9Penicillium janthinellumTrichoderma reeseiCellulaseCAZymesSecretomeBioethanol
collection DOAJ
language English
format Article
sources DOAJ
author AthiraRaj Sreeja-Raju
Meera Christopher
Prajeesh Kooloth-Valappil
Rajasree Kuni-Parambil
Digambar Vittal Gokhale
Meena Sankar
Amith Abraham
Ashok Pandey
Rajeev K. Sukumaran
spellingShingle AthiraRaj Sreeja-Raju
Meera Christopher
Prajeesh Kooloth-Valappil
Rajasree Kuni-Parambil
Digambar Vittal Gokhale
Meena Sankar
Amith Abraham
Ashok Pandey
Rajeev K. Sukumaran
Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30
Biotechnology for Biofuels
Penicillium janthinellum
Trichoderma reesei
Cellulase
CAZymes
Secretome
Bioethanol
author_facet AthiraRaj Sreeja-Raju
Meera Christopher
Prajeesh Kooloth-Valappil
Rajasree Kuni-Parambil
Digambar Vittal Gokhale
Meena Sankar
Amith Abraham
Ashok Pandey
Rajeev K. Sukumaran
author_sort AthiraRaj Sreeja-Raju
title Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30
title_short Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30
title_full Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30
title_fullStr Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30
title_full_unstemmed Penicillium janthinellum NCIM1366 shows improved biomass hydrolysis and a larger number of CAZymes with higher induction levels over Trichoderma reesei RUT-C30
title_sort penicillium janthinellum ncim1366 shows improved biomass hydrolysis and a larger number of cazymes with higher induction levels over trichoderma reesei rut-c30
publisher BMC
series Biotechnology for Biofuels
issn 1754-6834
publishDate 2020-12-01
description Abstract Background Major cost of bioethanol is attributed to enzymes employed in biomass hydrolysis. Biomass hydrolyzing enzymes are predominantly produced from the hyper-cellulolytic mutant filamentous fungus Trichoderma reesei RUT-C30. Several decades of research have failed to provide an industrial grade organism other than T. reesei, capable of producing higher titers of an effective synergistic biomass hydrolyzing enzyme cocktail. Penicillium janthinellum NCIM1366 was reported as a cellulase hyper producer and a potential alternative to T. reesei, but a comparison of their hydrolytic performance was seldom attempted. Results Hydrolysis of acid or alkali-pretreated rice straw using cellulase enzyme preparations from P. janthinellum and T. reesei indicated 37 and 43% higher glucose release, respectively, with P. janthinellum enzymes. A comparison of these fungi with respect to their secreted enzymes indicated that the crude enzyme preparation from P. janthinellum showed 28% higher overall cellulase activity. It also had an exceptional tenfold higher beta-glucosidase activity compared to that of T. reesei, leading to a lower cellobiose accumulation and thus alleviating the feedback inhibition. P. janthinellum secreted more number of proteins to the extracellular medium whose total concentration was 1.8-fold higher than T. reesei. Secretome analyses of the two fungi revealed higher number of CAZymes and a higher relative abundance of cellulases upon cellulose induction in the fungus. Conclusions The results revealed the ability of P. janthinellum for efficient biomass degradation through hyper cellulase production, and it outperformed the established industrial cellulase producer T. reesei in the hydrolysis experiments. A higher level of induction, larger number of secreted CAZymes and a high relative proportion of BGL to cellulases indicate the possible reasons for its performance advantage in biomass hydrolysis.
topic Penicillium janthinellum
Trichoderma reesei
Cellulase
CAZymes
Secretome
Bioethanol
url https://doi.org/10.1186/s13068-020-01830-9
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