Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy

Background and study aims Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. Patients and methods Two sets of 20...

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Main Authors: Olivia Pietri, Gada Rezgui, Aymeric Histace, Marine Camus, Isabelle Nion-Larmurier, Cynthia Li, Aymeric Becq, Einas Abou Ali, Olivier Romain, Ulriikka Chaput, Philippe Marteau, Christian Florent, Xavier Dray
Format: Article
Language:English
Published: Georg Thieme Verlag KG 2018-03-01
Series:Endoscopy International Open
Online Access:http://www.thieme-connect.de/DOI/DOI?10.1055/a-0573-1044
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spelling doaj-e01acb6d2be84d19bb4c36ba4d02ccde2020-11-25T03:37:28ZengGeorg Thieme Verlag KGEndoscopy International Open2364-37222196-97362018-03-010604E462E46910.1055/a-0573-1044Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopyOlivia Pietri0Gada Rezgui1Aymeric Histace2Marine Camus3Isabelle Nion-Larmurier4Cynthia Li5Aymeric Becq6Einas Abou Ali7Olivier Romain8Ulriikka Chaput9Philippe Marteau10Christian Florent11Xavier Dray12APHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceETIS, ENSEA, Cergy-Pontoise University, Cergy-Pontoise, France ETIS, ENSEA, Cergy-Pontoise University, Cergy-Pontoise, France APHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceETIS, ENSEA, Cergy-Pontoise University, Cergy-Pontoise, France APHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceBackground and study aims Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. Patients and methods Two sets of 200 SB-CE normal still frames were created. Two experienced SB-CE readers analyzed both sets of images twice, in a random order. Each still frame was categorized as presenting with < 10 % or ≥ 10 % of bubbles. Reproducibility (κ), sensitivity (Se), specificity (Sp), receiver operating characteristic curve, and calculation time were measured for different algorithms (Grey-level of co-occurrence matrix [GLCM], fractal dimension, Hough transform, and speeded-up robust features [SURF]) using the experts’ analysis as reference. Algorithms with highest reproducibility, Se and Sp were then selected for a validation step on the second set of frames. Criteria for validation were κ = 1, Se ≥ 90 %, Sp ≥ 85 %, and a calculation time < 1 second. Results Both SURF and GLCM algorithms had high operating points (Se and Sp over 90 %) and a perfect reproducibility (κ = 1). The validation step showed the GLCM detector strategy had the best diagnostic performances, with a Se of 95.79 %, a Sp of 95.19 %, and a calculation time of 0.037 seconds per frame. Conclusion A computed algorithm based on a GLCM detector strategy had high diagnostic performance allowing assessment of the abundance of bubbles in SB-CE still frames. This algorithm could be of interest for clinical use (quality reporting) and for research purposes (objective comparison tool of different preparations).http://www.thieme-connect.de/DOI/DOI?10.1055/a-0573-1044
collection DOAJ
language English
format Article
sources DOAJ
author Olivia Pietri
Gada Rezgui
Aymeric Histace
Marine Camus
Isabelle Nion-Larmurier
Cynthia Li
Aymeric Becq
Einas Abou Ali
Olivier Romain
Ulriikka Chaput
Philippe Marteau
Christian Florent
Xavier Dray
spellingShingle Olivia Pietri
Gada Rezgui
Aymeric Histace
Marine Camus
Isabelle Nion-Larmurier
Cynthia Li
Aymeric Becq
Einas Abou Ali
Olivier Romain
Ulriikka Chaput
Philippe Marteau
Christian Florent
Xavier Dray
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
Endoscopy International Open
author_facet Olivia Pietri
Gada Rezgui
Aymeric Histace
Marine Camus
Isabelle Nion-Larmurier
Cynthia Li
Aymeric Becq
Einas Abou Ali
Olivier Romain
Ulriikka Chaput
Philippe Marteau
Christian Florent
Xavier Dray
author_sort Olivia Pietri
title Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_short Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_full Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_fullStr Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_full_unstemmed Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
title_sort development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
publisher Georg Thieme Verlag KG
series Endoscopy International Open
issn 2364-3722
2196-9736
publishDate 2018-03-01
description Background and study aims Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. Patients and methods Two sets of 200 SB-CE normal still frames were created. Two experienced SB-CE readers analyzed both sets of images twice, in a random order. Each still frame was categorized as presenting with < 10 % or ≥ 10 % of bubbles. Reproducibility (κ), sensitivity (Se), specificity (Sp), receiver operating characteristic curve, and calculation time were measured for different algorithms (Grey-level of co-occurrence matrix [GLCM], fractal dimension, Hough transform, and speeded-up robust features [SURF]) using the experts’ analysis as reference. Algorithms with highest reproducibility, Se and Sp were then selected for a validation step on the second set of frames. Criteria for validation were κ = 1, Se ≥ 90 %, Sp ≥ 85 %, and a calculation time < 1 second. Results Both SURF and GLCM algorithms had high operating points (Se and Sp over 90 %) and a perfect reproducibility (κ = 1). The validation step showed the GLCM detector strategy had the best diagnostic performances, with a Se of 95.79 %, a Sp of 95.19 %, and a calculation time of 0.037 seconds per frame. Conclusion A computed algorithm based on a GLCM detector strategy had high diagnostic performance allowing assessment of the abundance of bubbles in SB-CE still frames. This algorithm could be of interest for clinical use (quality reporting) and for research purposes (objective comparison tool of different preparations).
url http://www.thieme-connect.de/DOI/DOI?10.1055/a-0573-1044
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