Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy
Background and study aims Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. Patients and methods Two sets of 20...
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Georg Thieme Verlag KG
2018-03-01
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doaj-e01acb6d2be84d19bb4c36ba4d02ccde2020-11-25T03:37:28ZengGeorg Thieme Verlag KGEndoscopy International Open2364-37222196-97362018-03-010604E462E46910.1055/a-0573-1044Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopyOlivia Pietri0Gada Rezgui1Aymeric Histace2Marine Camus3Isabelle Nion-Larmurier4Cynthia Li5Aymeric Becq6Einas Abou Ali7Olivier Romain8Ulriikka Chaput9Philippe Marteau10Christian Florent11Xavier Dray12APHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceETIS, ENSEA, Cergy-Pontoise University, Cergy-Pontoise, France ETIS, ENSEA, Cergy-Pontoise University, Cergy-Pontoise, France APHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceETIS, ENSEA, Cergy-Pontoise University, Cergy-Pontoise, France APHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceAPHP Saint Antoine Hospital, Department of Hepatogastroenterology, Paris, FranceBackground and study aims Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames. Patients and methods Two sets of 200 SB-CE normal still frames were created. Two experienced SB-CE readers analyzed both sets of images twice, in a random order. Each still frame was categorized as presenting with < 10 % or ≥ 10 % of bubbles. Reproducibility (κ), sensitivity (Se), specificity (Sp), receiver operating characteristic curve, and calculation time were measured for different algorithms (Grey-level of co-occurrence matrix [GLCM], fractal dimension, Hough transform, and speeded-up robust features [SURF]) using the experts’ analysis as reference. Algorithms with highest reproducibility, Se and Sp were then selected for a validation step on the second set of frames. Criteria for validation were κ = 1, Se ≥ 90 %, Sp ≥ 85 %, and a calculation time < 1 second. Results Both SURF and GLCM algorithms had high operating points (Se and Sp over 90 %) and a perfect reproducibility (κ = 1). The validation step showed the GLCM detector strategy had the best diagnostic performances, with a Se of 95.79 %, a Sp of 95.19 %, and a calculation time of 0.037 seconds per frame. Conclusion A computed algorithm based on a GLCM detector strategy had high diagnostic performance allowing assessment of the abundance of bubbles in SB-CE still frames. This algorithm could be of interest for clinical use (quality reporting) and for research purposes (objective comparison tool of different preparations).http://www.thieme-connect.de/DOI/DOI?10.1055/a-0573-1044 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Olivia Pietri Gada Rezgui Aymeric Histace Marine Camus Isabelle Nion-Larmurier Cynthia Li Aymeric Becq Einas Abou Ali Olivier Romain Ulriikka Chaput Philippe Marteau Christian Florent Xavier Dray |
spellingShingle |
Olivia Pietri Gada Rezgui Aymeric Histace Marine Camus Isabelle Nion-Larmurier Cynthia Li Aymeric Becq Einas Abou Ali Olivier Romain Ulriikka Chaput Philippe Marteau Christian Florent Xavier Dray Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy Endoscopy International Open |
author_facet |
Olivia Pietri Gada Rezgui Aymeric Histace Marine Camus Isabelle Nion-Larmurier Cynthia Li Aymeric Becq Einas Abou Ali Olivier Romain Ulriikka Chaput Philippe Marteau Christian Florent Xavier Dray |
author_sort |
Olivia Pietri |
title |
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy |
title_short |
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy |
title_full |
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy |
title_fullStr |
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy |
title_full_unstemmed |
Development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy |
title_sort |
development and validation of an automated algorithm to evaluate the abundance of bubbles in small bowel capsule endoscopy |
publisher |
Georg Thieme Verlag KG |
series |
Endoscopy International Open |
issn |
2364-3722 2196-9736 |
publishDate |
2018-03-01 |
description |
Background and study aims Bubbles can impair visualization of the small bowel (SB) mucosa during capsule endoscopy (CE). We aimed to develop and validate a computed algorithm that would allow evaluation of the abundance of bubbles in SB-CE still frames.
Patients and methods Two sets of 200 SB-CE normal still frames were created. Two experienced SB-CE readers analyzed both sets of images twice, in a random order. Each still frame was categorized as presenting with < 10 % or ≥ 10 % of bubbles. Reproducibility (κ), sensitivity (Se), specificity (Sp), receiver operating characteristic curve, and calculation time were measured for different algorithms (Grey-level of co-occurrence matrix [GLCM], fractal dimension, Hough transform, and speeded-up robust features [SURF]) using the experts’ analysis as reference. Algorithms with highest reproducibility, Se and Sp were then selected for a validation step on the second set of frames. Criteria for validation were κ = 1, Se ≥ 90 %, Sp ≥ 85 %, and a calculation time < 1 second.
Results Both SURF and GLCM algorithms had high operating points (Se and Sp over 90 %) and a perfect reproducibility (κ = 1). The validation step showed the GLCM detector strategy had the best diagnostic performances, with a Se of 95.79 %, a Sp of 95.19 %, and a calculation time of 0.037 seconds per frame.
Conclusion A computed algorithm based on a GLCM detector strategy had high diagnostic performance allowing assessment of the abundance of bubbles in SB-CE still frames. This algorithm could be of interest for clinical use (quality reporting) and for research purposes (objective comparison tool of different preparations). |
url |
http://www.thieme-connect.de/DOI/DOI?10.1055/a-0573-1044 |
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