Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques

Italian ryegrass (<i>Lolium perenne</i> ssp. <i>multiflorum</i> (Lam) Husnot) is a troublesome weed species in wheat (<i>Triticum aestivum</i>) production in the United States, severely affecting grain yields. Spatial mapping of ryegrass infestation in wheat field...

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Main Authors: Bishwa Sapkota, Vijay Singh, Clark Neely, Nithya Rajan, Muthukumar Bagavathiannan
Format: Article
Language:English
Published: MDPI AG 2020-09-01
Series:Remote Sensing
Subjects:
Online Access:https://www.mdpi.com/2072-4292/12/18/2977
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spelling doaj-dff21ebdd59847d3b5ab4eadf2d858832020-11-25T02:41:53ZengMDPI AGRemote Sensing2072-42922020-09-01122977297710.3390/rs12182977Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning TechniquesBishwa Sapkota0Vijay Singh1Clark Neely2Nithya Rajan3Muthukumar Bagavathiannan4Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77840, USADepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77840, USADepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77840, USADepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77840, USADepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX 77840, USAItalian ryegrass (<i>Lolium perenne</i> ssp. <i>multiflorum</i> (Lam) Husnot) is a troublesome weed species in wheat (<i>Triticum aestivum</i>) production in the United States, severely affecting grain yields. Spatial mapping of ryegrass infestation in wheat fields and early prediction of its impact on yield can assist management decision making. In this study, unmanned aerial systems (UAS)-based red, green and blue (RGB) imageries acquired at an early wheat growth stage in two different experimental sites were used for developing predictive models. Deep neural networks (DNNs) coupled with an extensive feature selection method were used to detect ryegrass in wheat and estimate ryegrass canopy coverage. Predictive models were developed by regressing early-season ryegrass canopy coverage (%) with end-of-season (at wheat maturity) biomass and seed yield of ryegrass, as well as biomass and grain yield reduction (%) of wheat. Italian ryegrass was detected with high accuracy (precision = 95.44 ± 4.27%, recall = 95.48 ± 5.05%, F-score = 95.56 ± 4.11%) using the best model which included four features: hue, saturation, excess green index, and visible atmospheric resistant index. End-of-season ryegrass biomass was predicted with high accuracy (R<sup>2</sup> = 0.87), whereas the other variables had moderate to high accuracy levels (R<sup>2</sup> values of 0.74 for ryegrass seed yield, 0.73 for wheat biomass reduction, and 0.69 for wheat grain yield reduction). The methodology demonstrated in the current study shows great potential for mapping and quantifying ryegrass infestation and predicting its competitive response in wheat, allowing for timely management decisions.https://www.mdpi.com/2072-4292/12/18/2977computer visiondeep neural networksprecision agriculturesite-specific managementunmanned aerial systemsUAVs
collection DOAJ
language English
format Article
sources DOAJ
author Bishwa Sapkota
Vijay Singh
Clark Neely
Nithya Rajan
Muthukumar Bagavathiannan
spellingShingle Bishwa Sapkota
Vijay Singh
Clark Neely
Nithya Rajan
Muthukumar Bagavathiannan
Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques
Remote Sensing
computer vision
deep neural networks
precision agriculture
site-specific management
unmanned aerial systems
UAVs
author_facet Bishwa Sapkota
Vijay Singh
Clark Neely
Nithya Rajan
Muthukumar Bagavathiannan
author_sort Bishwa Sapkota
title Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques
title_short Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques
title_full Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques
title_fullStr Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques
title_full_unstemmed Detection of Italian Ryegrass in Wheat and Prediction of Competitive Interactions Using Remote-Sensing and Machine-Learning Techniques
title_sort detection of italian ryegrass in wheat and prediction of competitive interactions using remote-sensing and machine-learning techniques
publisher MDPI AG
series Remote Sensing
issn 2072-4292
publishDate 2020-09-01
description Italian ryegrass (<i>Lolium perenne</i> ssp. <i>multiflorum</i> (Lam) Husnot) is a troublesome weed species in wheat (<i>Triticum aestivum</i>) production in the United States, severely affecting grain yields. Spatial mapping of ryegrass infestation in wheat fields and early prediction of its impact on yield can assist management decision making. In this study, unmanned aerial systems (UAS)-based red, green and blue (RGB) imageries acquired at an early wheat growth stage in two different experimental sites were used for developing predictive models. Deep neural networks (DNNs) coupled with an extensive feature selection method were used to detect ryegrass in wheat and estimate ryegrass canopy coverage. Predictive models were developed by regressing early-season ryegrass canopy coverage (%) with end-of-season (at wheat maturity) biomass and seed yield of ryegrass, as well as biomass and grain yield reduction (%) of wheat. Italian ryegrass was detected with high accuracy (precision = 95.44 ± 4.27%, recall = 95.48 ± 5.05%, F-score = 95.56 ± 4.11%) using the best model which included four features: hue, saturation, excess green index, and visible atmospheric resistant index. End-of-season ryegrass biomass was predicted with high accuracy (R<sup>2</sup> = 0.87), whereas the other variables had moderate to high accuracy levels (R<sup>2</sup> values of 0.74 for ryegrass seed yield, 0.73 for wheat biomass reduction, and 0.69 for wheat grain yield reduction). The methodology demonstrated in the current study shows great potential for mapping and quantifying ryegrass infestation and predicting its competitive response in wheat, allowing for timely management decisions.
topic computer vision
deep neural networks
precision agriculture
site-specific management
unmanned aerial systems
UAVs
url https://www.mdpi.com/2072-4292/12/18/2977
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