Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach

The discrimination of the bacteria that cause gastroenteritis through classical microbiological methods is very efficient in the great majority of the cases. However, the high cost of chemicals and the time spent for such identifications, about four days, could generate serious consequences for the...

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Main Authors: Mello Cesar, Ciuffi Katia J., Nassar Eduardo, Ribeiro Diórginis, Poppi Ronei Jesus
Format: Article
Language:English
Published: Sociedade Brasileira de Química 2006-01-01
Series:Journal of the Brazilian Chemical Society
Subjects:
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532006000100011
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spelling doaj-dee2199531f140728382e6b904355a752020-11-24T22:02:38ZengSociedade Brasileira de QuímicaJournal of the Brazilian Chemical Society0103-50531678-47902006-01-011717378Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approachMello CesarCiuffi Katia J.Nassar EduardoRibeiro DiórginisPoppi Ronei JesusThe discrimination of the bacteria that cause gastroenteritis through classical microbiological methods is very efficient in the great majority of the cases. However, the high cost of chemicals and the time spent for such identifications, about four days, could generate serious consequences for the patients. Thus, the search for low cost spectroscopic methods which would allow a fast and reagentless discrimination of these microorganisms is extremely relevant. In this work the main microorganisms that cause gastroenteritis: E. coli, S. chroleraesuis, S. flexneri were studied. For each of the microorganisms sixty different dispersions were prepared using physiological solution as solvent and its Raman spectra recorded. The 1D spectra obtained were similar, making it very difficult to differentiate the microorganisms. However, applying the 2D correlation method, it was possible to identify the microorganisms evaluated using the synchronous spectrum as "whole-organism fingerprinting" in a reduced time interval (~10 h).http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532006000100011whole-organism fingerprinting2D Ramanmicroorganismbioanalytical chemistrygastroenteritis
collection DOAJ
language English
format Article
sources DOAJ
author Mello Cesar
Ciuffi Katia J.
Nassar Eduardo
Ribeiro Diórginis
Poppi Ronei Jesus
spellingShingle Mello Cesar
Ciuffi Katia J.
Nassar Eduardo
Ribeiro Diórginis
Poppi Ronei Jesus
Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
Journal of the Brazilian Chemical Society
whole-organism fingerprinting
2D Raman
microorganism
bioanalytical chemistry
gastroenteritis
author_facet Mello Cesar
Ciuffi Katia J.
Nassar Eduardo
Ribeiro Diórginis
Poppi Ronei Jesus
author_sort Mello Cesar
title Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
title_short Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
title_full Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
title_fullStr Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
title_full_unstemmed Two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
title_sort two-dimensional low resolution raman spectroscopy applied to fast discrimination of clinically relevant microorganisms: a whole-organism fingerprinting approach
publisher Sociedade Brasileira de Química
series Journal of the Brazilian Chemical Society
issn 0103-5053
1678-4790
publishDate 2006-01-01
description The discrimination of the bacteria that cause gastroenteritis through classical microbiological methods is very efficient in the great majority of the cases. However, the high cost of chemicals and the time spent for such identifications, about four days, could generate serious consequences for the patients. Thus, the search for low cost spectroscopic methods which would allow a fast and reagentless discrimination of these microorganisms is extremely relevant. In this work the main microorganisms that cause gastroenteritis: E. coli, S. chroleraesuis, S. flexneri were studied. For each of the microorganisms sixty different dispersions were prepared using physiological solution as solvent and its Raman spectra recorded. The 1D spectra obtained were similar, making it very difficult to differentiate the microorganisms. However, applying the 2D correlation method, it was possible to identify the microorganisms evaluated using the synchronous spectrum as "whole-organism fingerprinting" in a reduced time interval (~10 h).
topic whole-organism fingerprinting
2D Raman
microorganism
bioanalytical chemistry
gastroenteritis
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532006000100011
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