Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System

Introduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures tha...

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Main Authors: Si Hyun Kim, Jeong Hwan Shin, Jeong Ha Mok, Shine Young Kim, Sae Am Song, Hye Ran Kim, Joong-Ki Kook, Young-Hyo Chang, Il Kwon Bae, Kwangha Lee
Format: Article
Language:English
Published: Hindawi Limited 2014-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2014/250408
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spelling doaj-de1c69c84bec45e5880f470a0009408f2020-11-24T21:11:43ZengHindawi LimitedBioMed Research International2314-61332314-61412014-01-01201410.1155/2014/250408250408Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 SystemSi Hyun Kim0Jeong Hwan Shin1Jeong Ha Mok2Shine Young Kim3Sae Am Song4Hye Ran Kim5Joong-Ki Kook6Young-Hyo Chang7Il Kwon Bae8Kwangha Lee9Department of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Internal Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of KoreaDepartment of Laboratory Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of KoreaDepartment of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju 501-759, Republic of KoreaKorean Collection for Type Cultures, Biological Resource Center, KRIBB, Daejeon 305-806, Republic of KoreaDepartment of Dental Hygiene, College of Medical and Life Science, Silla University, Busan 617-736, Republic of KoreaDepartment of Internal Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of KoreaIntroduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures that had been identified as C. famata (N=25), C. famata/C. guilliermondii (N=2), and C. guilliermondii (N=1) by the VITEK 2 system using the YST ID card were included. We identified these strains by MALDI-TOF MS and gene sequencing using the 28S rRNA and ITS genes and compared the results with those obtained by the VITEK 2 system. Results. All 28 isolates were finally identified as C. guilliermondii. Sequencing analysis of the 28S rRNA gene showed 99.80%–100% similarity with C. guilliermondii for all 28 strains. The ITS gene sequencing of the strains showed 98.34%–100% homology with C. guilliermondii. By MALDI-TOF, we could correctly identify 21 (75%) of 28 C. guilliermondii isolates. Conclusion. We should suspect misidentification when C. famata is reported by the VITEK 2 system, and we always should keep in mind the possibility of misidentification of any organism when an uncommon species is reported.http://dx.doi.org/10.1155/2014/250408
collection DOAJ
language English
format Article
sources DOAJ
author Si Hyun Kim
Jeong Hwan Shin
Jeong Ha Mok
Shine Young Kim
Sae Am Song
Hye Ran Kim
Joong-Ki Kook
Young-Hyo Chang
Il Kwon Bae
Kwangha Lee
spellingShingle Si Hyun Kim
Jeong Hwan Shin
Jeong Ha Mok
Shine Young Kim
Sae Am Song
Hye Ran Kim
Joong-Ki Kook
Young-Hyo Chang
Il Kwon Bae
Kwangha Lee
Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
BioMed Research International
author_facet Si Hyun Kim
Jeong Hwan Shin
Jeong Ha Mok
Shine Young Kim
Sae Am Song
Hye Ran Kim
Joong-Ki Kook
Young-Hyo Chang
Il Kwon Bae
Kwangha Lee
author_sort Si Hyun Kim
title Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
title_short Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
title_full Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
title_fullStr Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
title_full_unstemmed Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
title_sort misidentification of candida guilliermondii as c. famata among strains isolated from blood cultures by the vitek 2 system
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2014-01-01
description Introduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures that had been identified as C. famata (N=25), C. famata/C. guilliermondii (N=2), and C. guilliermondii (N=1) by the VITEK 2 system using the YST ID card were included. We identified these strains by MALDI-TOF MS and gene sequencing using the 28S rRNA and ITS genes and compared the results with those obtained by the VITEK 2 system. Results. All 28 isolates were finally identified as C. guilliermondii. Sequencing analysis of the 28S rRNA gene showed 99.80%–100% similarity with C. guilliermondii for all 28 strains. The ITS gene sequencing of the strains showed 98.34%–100% homology with C. guilliermondii. By MALDI-TOF, we could correctly identify 21 (75%) of 28 C. guilliermondii isolates. Conclusion. We should suspect misidentification when C. famata is reported by the VITEK 2 system, and we always should keep in mind the possibility of misidentification of any organism when an uncommon species is reported.
url http://dx.doi.org/10.1155/2014/250408
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