Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System
Introduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures tha...
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doaj-de1c69c84bec45e5880f470a0009408f2020-11-24T21:11:43ZengHindawi LimitedBioMed Research International2314-61332314-61412014-01-01201410.1155/2014/250408250408Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 SystemSi Hyun Kim0Jeong Hwan Shin1Jeong Ha Mok2Shine Young Kim3Sae Am Song4Hye Ran Kim5Joong-Ki Kook6Young-Hyo Chang7Il Kwon Bae8Kwangha Lee9Department of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Internal Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of KoreaDepartment of Laboratory Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of KoreaDepartment of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Laboratory Medicine, Inje University College of Medicine, Busan 614-735, Republic of KoreaDepartment of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju 501-759, Republic of KoreaKorean Collection for Type Cultures, Biological Resource Center, KRIBB, Daejeon 305-806, Republic of KoreaDepartment of Dental Hygiene, College of Medical and Life Science, Silla University, Busan 617-736, Republic of KoreaDepartment of Internal Medicine, Pusan National University School of Medicine, Busan 602-739, Republic of KoreaIntroduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures that had been identified as C. famata (N=25), C. famata/C. guilliermondii (N=2), and C. guilliermondii (N=1) by the VITEK 2 system using the YST ID card were included. We identified these strains by MALDI-TOF MS and gene sequencing using the 28S rRNA and ITS genes and compared the results with those obtained by the VITEK 2 system. Results. All 28 isolates were finally identified as C. guilliermondii. Sequencing analysis of the 28S rRNA gene showed 99.80%–100% similarity with C. guilliermondii for all 28 strains. The ITS gene sequencing of the strains showed 98.34%–100% homology with C. guilliermondii. By MALDI-TOF, we could correctly identify 21 (75%) of 28 C. guilliermondii isolates. Conclusion. We should suspect misidentification when C. famata is reported by the VITEK 2 system, and we always should keep in mind the possibility of misidentification of any organism when an uncommon species is reported.http://dx.doi.org/10.1155/2014/250408 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Si Hyun Kim Jeong Hwan Shin Jeong Ha Mok Shine Young Kim Sae Am Song Hye Ran Kim Joong-Ki Kook Young-Hyo Chang Il Kwon Bae Kwangha Lee |
spellingShingle |
Si Hyun Kim Jeong Hwan Shin Jeong Ha Mok Shine Young Kim Sae Am Song Hye Ran Kim Joong-Ki Kook Young-Hyo Chang Il Kwon Bae Kwangha Lee Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System BioMed Research International |
author_facet |
Si Hyun Kim Jeong Hwan Shin Jeong Ha Mok Shine Young Kim Sae Am Song Hye Ran Kim Joong-Ki Kook Young-Hyo Chang Il Kwon Bae Kwangha Lee |
author_sort |
Si Hyun Kim |
title |
Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System |
title_short |
Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System |
title_full |
Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System |
title_fullStr |
Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System |
title_full_unstemmed |
Misidentification of Candida guilliermondii as C. famata among Strains Isolated from Blood Cultures by the VITEK 2 System |
title_sort |
misidentification of candida guilliermondii as c. famata among strains isolated from blood cultures by the vitek 2 system |
publisher |
Hindawi Limited |
series |
BioMed Research International |
issn |
2314-6133 2314-6141 |
publishDate |
2014-01-01 |
description |
Introduction. The aim of this study was to differentiate between Candida famata and Candida guilliermondii correctly by using matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) and gene sequencing. Methods. Twenty-eight Candida strains from blood cultures that had been identified as C. famata (N=25), C. famata/C. guilliermondii (N=2), and C. guilliermondii (N=1) by the VITEK 2 system using the YST ID card were included. We identified these strains by MALDI-TOF MS and gene sequencing using the 28S rRNA and ITS genes and compared the results with those obtained by the VITEK 2 system. Results. All 28 isolates were finally identified as C. guilliermondii. Sequencing analysis of the 28S rRNA gene showed 99.80%–100% similarity with C. guilliermondii for all 28 strains. The ITS gene sequencing of the strains showed 98.34%–100% homology with C. guilliermondii. By MALDI-TOF, we could correctly identify 21 (75%) of 28 C. guilliermondii isolates. Conclusion. We should suspect misidentification when C. famata is reported by the VITEK 2 system, and we always should keep in mind the possibility of misidentification of any organism when an uncommon species is reported. |
url |
http://dx.doi.org/10.1155/2014/250408 |
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