NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy

Abstract Checkpoint blockade-mediated immunotherapy is emerging as an effective treatment modality for multiple cancer types. However, cancer cells frequently evade the immune system, compromising the effectiveness of immunotherapy. It is crucial to develop screening methods to identify the patients...

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Main Authors: Sayuri Yoshihama, Steven X. Cho, Jason Yeung, Xuedong Pan, Gregory Lizee, Kranti Konganti, Valen E. Johnson, Koichi S. Kobayashi
Format: Article
Language:English
Published: Nature Publishing Group 2021-02-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-82729-9
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spelling doaj-de1241d0f963406ab60cbcf3271651f42021-02-07T12:32:11ZengNature Publishing GroupScientific Reports2045-23222021-02-0111111210.1038/s41598-021-82729-9NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapySayuri Yoshihama0Steven X. Cho1Jason Yeung2Xuedong Pan3Gregory Lizee4Kranti Konganti5Valen E. Johnson6Koichi S. Kobayashi7Department of Microbial Pathogenesis and Immunology, Texas A&M Health Science CenterDepartment of Immunology, Graduate School of Medicine, Hokkaido UniversityDepartment of Microbial Pathogenesis and Immunology, Texas A&M Health Science CenterDepartment of Statistics, Texas A&M UniversityDepartments of Melanoma Medical Oncology and Immunology, The University of Texas MD Anderson Cancer CenterTexas A&M Institute for Genome Science and Society, Texas A&M UniversityDepartment of Statistics, Texas A&M UniversityDepartment of Microbial Pathogenesis and Immunology, Texas A&M Health Science CenterAbstract Checkpoint blockade-mediated immunotherapy is emerging as an effective treatment modality for multiple cancer types. However, cancer cells frequently evade the immune system, compromising the effectiveness of immunotherapy. It is crucial to develop screening methods to identify the patients who would most benefit from these therapies because of the risk of the side effects and the high cost of treatment. Here we show that expression of the MHC class I transactivator (CITA), NLRC5, is important for efficient responses to anti-CTLA-4 and anti-PD1 checkpoint blockade therapies. Melanoma tumors derived from patients responding to immunotherapy exhibited significantly higher expression of NLRC5 and MHC class I-related genes compared to non-responding patients. In addition, multivariate analysis that included the number of tumor-associated non-synonymous mutations, predicted neo-antigen load and PD-L2 expression was capable of further stratifying responders and non-responders to anti-CTLA4 therapy. Moreover, expression or methylation of NLRC5 together with total somatic mutation number were significantly correlated with increased patient survival. These results suggest that NLRC5 tumor expression, alone or together with tumor mutation load constitutes a valuable predictive biomarker for both prognosis and response to anti-CTLA-4 and potentially anti-PD1 blockade immunotherapy in melanoma patients.https://doi.org/10.1038/s41598-021-82729-9
collection DOAJ
language English
format Article
sources DOAJ
author Sayuri Yoshihama
Steven X. Cho
Jason Yeung
Xuedong Pan
Gregory Lizee
Kranti Konganti
Valen E. Johnson
Koichi S. Kobayashi
spellingShingle Sayuri Yoshihama
Steven X. Cho
Jason Yeung
Xuedong Pan
Gregory Lizee
Kranti Konganti
Valen E. Johnson
Koichi S. Kobayashi
NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
Scientific Reports
author_facet Sayuri Yoshihama
Steven X. Cho
Jason Yeung
Xuedong Pan
Gregory Lizee
Kranti Konganti
Valen E. Johnson
Koichi S. Kobayashi
author_sort Sayuri Yoshihama
title NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
title_short NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
title_full NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
title_fullStr NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
title_full_unstemmed NLRC5/CITA expression correlates with efficient response to checkpoint blockade immunotherapy
title_sort nlrc5/cita expression correlates with efficient response to checkpoint blockade immunotherapy
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-02-01
description Abstract Checkpoint blockade-mediated immunotherapy is emerging as an effective treatment modality for multiple cancer types. However, cancer cells frequently evade the immune system, compromising the effectiveness of immunotherapy. It is crucial to develop screening methods to identify the patients who would most benefit from these therapies because of the risk of the side effects and the high cost of treatment. Here we show that expression of the MHC class I transactivator (CITA), NLRC5, is important for efficient responses to anti-CTLA-4 and anti-PD1 checkpoint blockade therapies. Melanoma tumors derived from patients responding to immunotherapy exhibited significantly higher expression of NLRC5 and MHC class I-related genes compared to non-responding patients. In addition, multivariate analysis that included the number of tumor-associated non-synonymous mutations, predicted neo-antigen load and PD-L2 expression was capable of further stratifying responders and non-responders to anti-CTLA4 therapy. Moreover, expression or methylation of NLRC5 together with total somatic mutation number were significantly correlated with increased patient survival. These results suggest that NLRC5 tumor expression, alone or together with tumor mutation load constitutes a valuable predictive biomarker for both prognosis and response to anti-CTLA-4 and potentially anti-PD1 blockade immunotherapy in melanoma patients.
url https://doi.org/10.1038/s41598-021-82729-9
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