Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community

Plant-derived carbon (PDC) released by roots has a strong effect on root-associated bacterial community, which is critical for plant fitness in natural environments. However, the freshly exuded PDC can be diluted by the ancient soil-derived carbon (SDC) at a short distance from root apices. Thus, th...

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Main Authors: Yang Zhou, Qing Yao, Honghui Zhu
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-11-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2020.594890/full
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spelling doaj-de1055b64a3f49648c5607baf43648bb2020-11-25T04:07:15ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-11-011110.3389/fmicb.2020.594890594890Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial CommunityYang Zhou0Qing Yao1Honghui Zhu2State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Open Laboratory of Applied Microbiology, Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, ChinaCollege of Horticulture, South China Agricultural University, Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Guangdong Engineering Research Center for Litchi, Guangdong Engineering Research Center for Grass Science, Guangzhou, ChinaState Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Open Laboratory of Applied Microbiology, Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, ChinaPlant-derived carbon (PDC) released by roots has a strong effect on root-associated bacterial community, which is critical for plant fitness in natural environments. However, the freshly exuded PDC can be diluted by the ancient soil-derived carbon (SDC) at a short distance from root apices. Thus, the rhizosphere C pools are normally dominated by SDC rather than PDC. Yet, how PDC and SDC interact to regulate root-associated bacterial community is largely unknown. In this study, a grass species and a legume species were planted in two contrasting matrixes, quartz sand and soil, to assess the role of PDC and SDC in regulating root-associated bacterial community, and to explore whether SDC affects the influence of PDC on bacterial community in soil. Our results indicated that the legume plant showed significantly positive priming effect on soil organic matter decomposition but the grass plant did not. PDC significantly shaped bacterial community in sand culture as indicated by PCR-DGGE and high-throughput sequencing of bacterial 16S rRNA gene. Intriguingly, we found that dissimilarity of bacterial communities associated with two plant species and the percentage of specific OTUs in quartz sand were significantly higher than those in soil. Moreover, several biomarkers enriched by plants in quartz sand turned to be general taxa in soil, which indicated that SDC attenuated the regulation of bacterial community by PDC. Taken together, these results suggest that SDC interacted with PDC and the root-associated microbial community, thus acted as soil buffering component of biological process contributing to soil resilience. The importance of PDC in structuring rhizosphere bacterial community needs to be reconsidered in the context of wider contribution of other C pool, such as SDC.https://www.frontiersin.org/articles/10.3389/fmicb.2020.594890/fullplant-derived Csoil-derived Croot-associated bacterial communityculture matrixplant species
collection DOAJ
language English
format Article
sources DOAJ
author Yang Zhou
Qing Yao
Honghui Zhu
spellingShingle Yang Zhou
Qing Yao
Honghui Zhu
Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
Frontiers in Microbiology
plant-derived C
soil-derived C
root-associated bacterial community
culture matrix
plant species
author_facet Yang Zhou
Qing Yao
Honghui Zhu
author_sort Yang Zhou
title Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
title_short Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
title_full Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
title_fullStr Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
title_full_unstemmed Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
title_sort soil organic carbon attenuates the influence of plants on root-associated bacterial community
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-11-01
description Plant-derived carbon (PDC) released by roots has a strong effect on root-associated bacterial community, which is critical for plant fitness in natural environments. However, the freshly exuded PDC can be diluted by the ancient soil-derived carbon (SDC) at a short distance from root apices. Thus, the rhizosphere C pools are normally dominated by SDC rather than PDC. Yet, how PDC and SDC interact to regulate root-associated bacterial community is largely unknown. In this study, a grass species and a legume species were planted in two contrasting matrixes, quartz sand and soil, to assess the role of PDC and SDC in regulating root-associated bacterial community, and to explore whether SDC affects the influence of PDC on bacterial community in soil. Our results indicated that the legume plant showed significantly positive priming effect on soil organic matter decomposition but the grass plant did not. PDC significantly shaped bacterial community in sand culture as indicated by PCR-DGGE and high-throughput sequencing of bacterial 16S rRNA gene. Intriguingly, we found that dissimilarity of bacterial communities associated with two plant species and the percentage of specific OTUs in quartz sand were significantly higher than those in soil. Moreover, several biomarkers enriched by plants in quartz sand turned to be general taxa in soil, which indicated that SDC attenuated the regulation of bacterial community by PDC. Taken together, these results suggest that SDC interacted with PDC and the root-associated microbial community, thus acted as soil buffering component of biological process contributing to soil resilience. The importance of PDC in structuring rhizosphere bacterial community needs to be reconsidered in the context of wider contribution of other C pool, such as SDC.
topic plant-derived C
soil-derived C
root-associated bacterial community
culture matrix
plant species
url https://www.frontiersin.org/articles/10.3389/fmicb.2020.594890/full
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AT qingyao soilorganiccarbonattenuatestheinfluenceofplantsonrootassociatedbacterialcommunity
AT honghuizhu soilorganiccarbonattenuatestheinfluenceofplantsonrootassociatedbacterialcommunity
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