Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.

Like other important cereal crop in modern agricultural production, maize is also threatened by drought. And the drought stress during maize filling stage will directly affect the quality (protein or oil concentration) and also the weight of grain. Therefore, different from previous studies focusing...

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Main Authors: Hongyu Jin, Songtao Liu, Tinashe Zenda, Xuan Wang, Guo Liu, Huijun Duan
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0223786
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spelling doaj-dc34cfd3ba2e4a8faa2f7ebdec598b6a2021-03-03T21:11:14ZengPublic Library of Science (PLoS)PLoS ONE1932-62032019-01-011410e022378610.1371/journal.pone.0223786Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.Hongyu JinSongtao LiuTinashe ZendaXuan WangGuo LiuHuijun DuanLike other important cereal crop in modern agricultural production, maize is also threatened by drought. And the drought stress during maize filling stage will directly affect the quality (protein or oil concentration) and also the weight of grain. Therefore, different from previous studies focusing on inbred lines and pot experiment at seedling stage, current study selected filling stage of the adult plant and planting maize in the experimental field. Two hybrids cultivars with different drought tolerant were used for drought and water treatment respectively. We performed transcriptome sequencing analysis of 4 groups, 12 samples, and obtained 651.08 million raw reads. Then the data were further processed by mapping to a reference genome, GO annotation, enrichment analysis and so on. Among them we focus on the different change trends of water treatment and drought treatment, and the different responses of two drought-tolerant cultivars to drought treatment. Through the analysis, several transcripts which encode nitrogen metabolic, protein phosphorylation, MYB,AP2/ERF, HB transcriptional factor, O-glycosyl hydrolases and organic acid metabolic process were implicated with maize drought stress. Our data will offer insights of the identification of genes involved in maize drought stress tolerance, which provides a theoretical basis for maize drought resistance breeding.https://doi.org/10.1371/journal.pone.0223786
collection DOAJ
language English
format Article
sources DOAJ
author Hongyu Jin
Songtao Liu
Tinashe Zenda
Xuan Wang
Guo Liu
Huijun Duan
spellingShingle Hongyu Jin
Songtao Liu
Tinashe Zenda
Xuan Wang
Guo Liu
Huijun Duan
Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
PLoS ONE
author_facet Hongyu Jin
Songtao Liu
Tinashe Zenda
Xuan Wang
Guo Liu
Huijun Duan
author_sort Hongyu Jin
title Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
title_short Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
title_full Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
title_fullStr Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
title_full_unstemmed Maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
title_sort maize leaves drought-responsive genes revealed by comparative transcriptome of two cultivars during the filling stage.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2019-01-01
description Like other important cereal crop in modern agricultural production, maize is also threatened by drought. And the drought stress during maize filling stage will directly affect the quality (protein or oil concentration) and also the weight of grain. Therefore, different from previous studies focusing on inbred lines and pot experiment at seedling stage, current study selected filling stage of the adult plant and planting maize in the experimental field. Two hybrids cultivars with different drought tolerant were used for drought and water treatment respectively. We performed transcriptome sequencing analysis of 4 groups, 12 samples, and obtained 651.08 million raw reads. Then the data were further processed by mapping to a reference genome, GO annotation, enrichment analysis and so on. Among them we focus on the different change trends of water treatment and drought treatment, and the different responses of two drought-tolerant cultivars to drought treatment. Through the analysis, several transcripts which encode nitrogen metabolic, protein phosphorylation, MYB,AP2/ERF, HB transcriptional factor, O-glycosyl hydrolases and organic acid metabolic process were implicated with maize drought stress. Our data will offer insights of the identification of genes involved in maize drought stress tolerance, which provides a theoretical basis for maize drought resistance breeding.
url https://doi.org/10.1371/journal.pone.0223786
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