Multiple phase transitions in an agent-based evolutionary model with neutral fitness

Null models are crucial for understanding evolutionary processes such as speciation and adaptive radiation. We analyse an agent-based null model, considering a case without selection—neutral evolution—in which organisms are defined only by phenotype. Universal dynamics has previously been demonstrat...

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Main Authors: Dawn M. King, Adam D. Scott, Sonya Bahar
Format: Article
Language:English
Published: The Royal Society 2017-01-01
Series:Royal Society Open Science
Subjects:
Online Access:https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.170005
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spelling doaj-dc21228b7d5545c0bf5ae5771b5007f12020-11-25T04:00:47ZengThe Royal SocietyRoyal Society Open Science2054-57032017-01-014410.1098/rsos.170005170005Multiple phase transitions in an agent-based evolutionary model with neutral fitnessDawn M. KingAdam D. ScottSonya BaharNull models are crucial for understanding evolutionary processes such as speciation and adaptive radiation. We analyse an agent-based null model, considering a case without selection—neutral evolution—in which organisms are defined only by phenotype. Universal dynamics has previously been demonstrated in a related model on a neutral fitness landscape, showing that this system belongs to the directed percolation (DP) universality class. The traditional null condition of neutral fitness (where fitness is defined as the number of offspring each organism produces) is extended here to include equal probability of death among organisms. We identify two types of phase transition: (i) a non-equilibrium DP transition through generational time (i.e. survival), and (ii) an equilibrium ordinary percolation transition through the phenotype space (based on links between mating organisms). Owing to the dynamical rules of the DP reaction–diffusion process, organisms can only sparsely fill the phenotype space, resulting in significant phenotypic diversity within a cluster of mating organisms. This highlights the necessity of understanding hierarchical evolutionary relationships, rather than merely developing taxonomies based on phenotypic similarity, in order to develop models that can explain phylogenetic patterns found in the fossil record or to make hypotheses for the incomplete fossil record of deep time.https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.170005phase transitionextinctionagent-based modelneutral theoryclusteringspeciation
collection DOAJ
language English
format Article
sources DOAJ
author Dawn M. King
Adam D. Scott
Sonya Bahar
spellingShingle Dawn M. King
Adam D. Scott
Sonya Bahar
Multiple phase transitions in an agent-based evolutionary model with neutral fitness
Royal Society Open Science
phase transition
extinction
agent-based model
neutral theory
clustering
speciation
author_facet Dawn M. King
Adam D. Scott
Sonya Bahar
author_sort Dawn M. King
title Multiple phase transitions in an agent-based evolutionary model with neutral fitness
title_short Multiple phase transitions in an agent-based evolutionary model with neutral fitness
title_full Multiple phase transitions in an agent-based evolutionary model with neutral fitness
title_fullStr Multiple phase transitions in an agent-based evolutionary model with neutral fitness
title_full_unstemmed Multiple phase transitions in an agent-based evolutionary model with neutral fitness
title_sort multiple phase transitions in an agent-based evolutionary model with neutral fitness
publisher The Royal Society
series Royal Society Open Science
issn 2054-5703
publishDate 2017-01-01
description Null models are crucial for understanding evolutionary processes such as speciation and adaptive radiation. We analyse an agent-based null model, considering a case without selection—neutral evolution—in which organisms are defined only by phenotype. Universal dynamics has previously been demonstrated in a related model on a neutral fitness landscape, showing that this system belongs to the directed percolation (DP) universality class. The traditional null condition of neutral fitness (where fitness is defined as the number of offspring each organism produces) is extended here to include equal probability of death among organisms. We identify two types of phase transition: (i) a non-equilibrium DP transition through generational time (i.e. survival), and (ii) an equilibrium ordinary percolation transition through the phenotype space (based on links between mating organisms). Owing to the dynamical rules of the DP reaction–diffusion process, organisms can only sparsely fill the phenotype space, resulting in significant phenotypic diversity within a cluster of mating organisms. This highlights the necessity of understanding hierarchical evolutionary relationships, rather than merely developing taxonomies based on phenotypic similarity, in order to develop models that can explain phylogenetic patterns found in the fossil record or to make hypotheses for the incomplete fossil record of deep time.
topic phase transition
extinction
agent-based model
neutral theory
clustering
speciation
url https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.170005
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AT sonyabahar multiplephasetransitionsinanagentbasedevolutionarymodelwithneutralfitness
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