Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach

BackgroundMost of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. ObjectiveThis study aimed to develop an effective predicti...

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Main Authors: Li, Daowei, Zhang, Qiang, Tan, Yue, Feng, Xinghuo, Yue, Yuanyi, Bai, Yuhan, Li, Jimeng, Li, Jiahang, Xu, Youjun, Chen, Shiyu, Xiao, Si-Yu, Sun, Muyan, Li, Xiaona, Zhu, Fang
Format: Article
Language:English
Published: JMIR Publications 2020-11-01
Series:JMIR Medical Informatics
Online Access:http://medinform.jmir.org/2020/11/e21604/
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spelling doaj-dba1a7377bb745ddb4e16e4fab0759c82021-05-02T19:28:07ZengJMIR PublicationsJMIR Medical Informatics2291-96942020-11-01811e2160410.2196/21604Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning ApproachLi, DaoweiZhang, QiangTan, YueFeng, XinghuoYue, YuanyiBai, YuhanLi, JimengLi, JiahangXu, YoujunChen, ShiyuXiao, Si-YuSun, MuyanLi, XiaonaZhu, Fang BackgroundMost of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. ObjectiveThis study aimed to develop an effective prediction model for COVID-19 severity by combining radiological outcome with clinical biochemical indexes. MethodsA total of 46 patients with COVID-19 (10 severe, 36 nonsevere) were examined. To build the prediction model, a set of 27 severe and 151 nonsevere clinical laboratory records and computerized tomography (CT) records were collected from these patients. We managed to extract specific features from the patients’ CT images by using a recently published convolutional neural network. We also trained a machine learning model combining these features with clinical laboratory results. ResultsWe present a prediction model combining patients’ radiological outcomes with their clinical biochemical indexes to identify severe COVID-19 cases. The prediction model yielded a cross-validated area under the receiver operating characteristic (AUROC) score of 0.93 and an F1 score of 0.89, which showed a 6% and 15% improvement, respectively, compared to the models based on laboratory test features only. In addition, we developed a statistical model for forecasting COVID-19 severity based on the results of patients’ laboratory tests performed before they were classified as severe cases; this model yielded an AUROC score of 0.81. ConclusionsTo our knowledge, this is the first report predicting the clinical progression of COVID-19, as well as forecasting severity, based on a combined analysis using laboratory tests and CT images.http://medinform.jmir.org/2020/11/e21604/
collection DOAJ
language English
format Article
sources DOAJ
author Li, Daowei
Zhang, Qiang
Tan, Yue
Feng, Xinghuo
Yue, Yuanyi
Bai, Yuhan
Li, Jimeng
Li, Jiahang
Xu, Youjun
Chen, Shiyu
Xiao, Si-Yu
Sun, Muyan
Li, Xiaona
Zhu, Fang
spellingShingle Li, Daowei
Zhang, Qiang
Tan, Yue
Feng, Xinghuo
Yue, Yuanyi
Bai, Yuhan
Li, Jimeng
Li, Jiahang
Xu, Youjun
Chen, Shiyu
Xiao, Si-Yu
Sun, Muyan
Li, Xiaona
Zhu, Fang
Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
JMIR Medical Informatics
author_facet Li, Daowei
Zhang, Qiang
Tan, Yue
Feng, Xinghuo
Yue, Yuanyi
Bai, Yuhan
Li, Jimeng
Li, Jiahang
Xu, Youjun
Chen, Shiyu
Xiao, Si-Yu
Sun, Muyan
Li, Xiaona
Zhu, Fang
author_sort Li, Daowei
title Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_short Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_full Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_fullStr Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_full_unstemmed Prediction of COVID-19 Severity Using Chest Computed Tomography and Laboratory Measurements: Evaluation Using a Machine Learning Approach
title_sort prediction of covid-19 severity using chest computed tomography and laboratory measurements: evaluation using a machine learning approach
publisher JMIR Publications
series JMIR Medical Informatics
issn 2291-9694
publishDate 2020-11-01
description BackgroundMost of the mortality resulting from COVID-19 has been associated with severe disease. Effective treatment of severe cases remains a challenge due to the lack of early detection of the infection. ObjectiveThis study aimed to develop an effective prediction model for COVID-19 severity by combining radiological outcome with clinical biochemical indexes. MethodsA total of 46 patients with COVID-19 (10 severe, 36 nonsevere) were examined. To build the prediction model, a set of 27 severe and 151 nonsevere clinical laboratory records and computerized tomography (CT) records were collected from these patients. We managed to extract specific features from the patients’ CT images by using a recently published convolutional neural network. We also trained a machine learning model combining these features with clinical laboratory results. ResultsWe present a prediction model combining patients’ radiological outcomes with their clinical biochemical indexes to identify severe COVID-19 cases. The prediction model yielded a cross-validated area under the receiver operating characteristic (AUROC) score of 0.93 and an F1 score of 0.89, which showed a 6% and 15% improvement, respectively, compared to the models based on laboratory test features only. In addition, we developed a statistical model for forecasting COVID-19 severity based on the results of patients’ laboratory tests performed before they were classified as severe cases; this model yielded an AUROC score of 0.81. ConclusionsTo our knowledge, this is the first report predicting the clinical progression of COVID-19, as well as forecasting severity, based on a combined analysis using laboratory tests and CT images.
url http://medinform.jmir.org/2020/11/e21604/
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