Micro-computed tomography: Introducing new dimensions to taxonomy

Continuous improvements in the resolution of three-dimensional imaging have led to an increased application of these techniques in conventional taxonomic research in recent years. Coupled with an ever increasing research effort in cybertaxonomy, three-dimensional imaging could give a boost to the de...

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Main Authors: Sarah Faulwetter, Aikaterini Vasileiadou, Michail Kouratoras, Thanos Dailianis, Christos Arvanitidis
Format: Article
Language:English
Published: Pensoft Publishers 2013-02-01
Series:ZooKeys
Online Access:http://zookeys.pensoft.net/lib/ajax_srv/article_elements_srv.php?action=download_pdf&item_id=3650
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spelling doaj-da51842c74724a998fbd2520285b97b02020-11-24T21:33:05ZengPensoft PublishersZooKeys1313-29891313-29702013-02-01263014510.3897/zookeys.263.42613650Micro-computed tomography: Introducing new dimensions to taxonomySarah FaulwetterAikaterini VasileiadouMichail KouratorasThanos DailianisChristos ArvanitidisContinuous improvements in the resolution of three-dimensional imaging have led to an increased application of these techniques in conventional taxonomic research in recent years. Coupled with an ever increasing research effort in cybertaxonomy, three-dimensional imaging could give a boost to the development of virtual specimen collections, allowing rapid and simultaneous access to accurate virtual representations of type material. This paper explores the potential of micro-computed tomography (X-ray micro-tomography), a non-destructive three-dimensional imaging technique based on mapping X-ray attenuation in the scanned object, for supporting research in systematics and taxonomy. The subsequent use of these data as virtual type material, so-called “cybertypes”, and the creation of virtual collections lie at the core of this potential. Sample preparation, image acquisition, data processing and presentation of results are demonstrated using polychaetes (bristle worms), a representative taxon of macro-invertebrates, as a study object. Effects of the technique on the morphological, anatomical and molecular identity of the specimens are investigated. The paper evaluates the results and discusses the potential and the limitations of the technique for creating cybertypes. It also discusses the challenges that the community might face to establish virtual collections. Potential future applications of three-dimensional information in taxonomic research are outlined, including an outlook to new ways of producing, disseminating and publishing taxonomic information.http://zookeys.pensoft.net/lib/ajax_srv/article_elements_srv.php?action=download_pdf&item_id=3650
collection DOAJ
language English
format Article
sources DOAJ
author Sarah Faulwetter
Aikaterini Vasileiadou
Michail Kouratoras
Thanos Dailianis
Christos Arvanitidis
spellingShingle Sarah Faulwetter
Aikaterini Vasileiadou
Michail Kouratoras
Thanos Dailianis
Christos Arvanitidis
Micro-computed tomography: Introducing new dimensions to taxonomy
ZooKeys
author_facet Sarah Faulwetter
Aikaterini Vasileiadou
Michail Kouratoras
Thanos Dailianis
Christos Arvanitidis
author_sort Sarah Faulwetter
title Micro-computed tomography: Introducing new dimensions to taxonomy
title_short Micro-computed tomography: Introducing new dimensions to taxonomy
title_full Micro-computed tomography: Introducing new dimensions to taxonomy
title_fullStr Micro-computed tomography: Introducing new dimensions to taxonomy
title_full_unstemmed Micro-computed tomography: Introducing new dimensions to taxonomy
title_sort micro-computed tomography: introducing new dimensions to taxonomy
publisher Pensoft Publishers
series ZooKeys
issn 1313-2989
1313-2970
publishDate 2013-02-01
description Continuous improvements in the resolution of three-dimensional imaging have led to an increased application of these techniques in conventional taxonomic research in recent years. Coupled with an ever increasing research effort in cybertaxonomy, three-dimensional imaging could give a boost to the development of virtual specimen collections, allowing rapid and simultaneous access to accurate virtual representations of type material. This paper explores the potential of micro-computed tomography (X-ray micro-tomography), a non-destructive three-dimensional imaging technique based on mapping X-ray attenuation in the scanned object, for supporting research in systematics and taxonomy. The subsequent use of these data as virtual type material, so-called “cybertypes”, and the creation of virtual collections lie at the core of this potential. Sample preparation, image acquisition, data processing and presentation of results are demonstrated using polychaetes (bristle worms), a representative taxon of macro-invertebrates, as a study object. Effects of the technique on the morphological, anatomical and molecular identity of the specimens are investigated. The paper evaluates the results and discusses the potential and the limitations of the technique for creating cybertypes. It also discusses the challenges that the community might face to establish virtual collections. Potential future applications of three-dimensional information in taxonomic research are outlined, including an outlook to new ways of producing, disseminating and publishing taxonomic information.
url http://zookeys.pensoft.net/lib/ajax_srv/article_elements_srv.php?action=download_pdf&item_id=3650
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