Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.

Periods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression...

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Main Authors: Kunichika Tsumoto, Gen Kurosawa, Tetsuya Yoshinaga, Kazuyuki Aihara
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2011-01-01
Series:PLoS ONE
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21698191/?tool=EBI
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spelling doaj-d905b7eab139457badc82802447c42f22021-03-04T01:49:39ZengPublic Library of Science (PLoS)PLoS ONE1932-62032011-01-0166e2088010.1371/journal.pone.0020880Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.Kunichika TsumotoGen KurosawaTetsuya YoshinagaKazuyuki AiharaPeriods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression of specific clock genes. This molecular response to light is called light adaptation. Does light adaptation occur in other organisms? Using published experimental data, we first estimated the time course of the up-regulation rate of gene expression by light. Intriguingly, the estimated up-regulation rate was transient during light period in mice as well as Neurospora. Next, we constructed a computational model to consider how light adaptation had an effect on the entrainment of circadian oscillation to 24-h light-dark cycles. We found that cellular oscillations are more likely to be destabilized without light adaption especially when light intensity is very high. From the present results, we predict that the instability of circadian oscillations under 24-h light-dark cycles can be experimentally observed if light adaptation is altered. We conclude that the functional consequence of light adaptation is to increase the adjustability to 24-h light-dark cycles and then adapt to fluctuating environments in nature.https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21698191/?tool=EBI
collection DOAJ
language English
format Article
sources DOAJ
author Kunichika Tsumoto
Gen Kurosawa
Tetsuya Yoshinaga
Kazuyuki Aihara
spellingShingle Kunichika Tsumoto
Gen Kurosawa
Tetsuya Yoshinaga
Kazuyuki Aihara
Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
PLoS ONE
author_facet Kunichika Tsumoto
Gen Kurosawa
Tetsuya Yoshinaga
Kazuyuki Aihara
author_sort Kunichika Tsumoto
title Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
title_short Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
title_full Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
title_fullStr Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
title_full_unstemmed Modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
title_sort modeling light adaptation in circadian clock: prediction of the response that stabilizes entrainment.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2011-01-01
description Periods of biological clocks are close to but often different from the rotation period of the earth. Thus, the clocks of organisms must be adjusted to synchronize with day-night cycles. The primary signal that adjusts the clocks is light. In Neurospora, light transiently up-regulates the expression of specific clock genes. This molecular response to light is called light adaptation. Does light adaptation occur in other organisms? Using published experimental data, we first estimated the time course of the up-regulation rate of gene expression by light. Intriguingly, the estimated up-regulation rate was transient during light period in mice as well as Neurospora. Next, we constructed a computational model to consider how light adaptation had an effect on the entrainment of circadian oscillation to 24-h light-dark cycles. We found that cellular oscillations are more likely to be destabilized without light adaption especially when light intensity is very high. From the present results, we predict that the instability of circadian oscillations under 24-h light-dark cycles can be experimentally observed if light adaptation is altered. We conclude that the functional consequence of light adaptation is to increase the adjustability to 24-h light-dark cycles and then adapt to fluctuating environments in nature.
url https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21698191/?tool=EBI
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AT genkurosawa modelinglightadaptationincircadianclockpredictionoftheresponsethatstabilizesentrainment
AT tetsuyayoshinaga modelinglightadaptationincircadianclockpredictionoftheresponsethatstabilizesentrainment
AT kazuyukiaihara modelinglightadaptationincircadianclockpredictionoftheresponsethatstabilizesentrainment
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