PCG-cut: graph driven segmentation of the prostate central gland.

Prostate cancer is the most abundant cancer in men, with over 200,000 expected new cases and around 28,000 deaths in 2012 in the US alone. In this study, the segmentation results for the prostate central gland (PCG) in MR scans are presented. The aim of this research study is to apply a graph-based...

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Main Author: Jan Egger
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3795743?pdf=render
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spelling doaj-d8a6a4a1c5d441d3a46828677528fd8f2020-11-25T02:35:18ZengPublic Library of Science (PLoS)PLoS ONE1932-62032013-01-01810e7664510.1371/journal.pone.0076645PCG-cut: graph driven segmentation of the prostate central gland.Jan EggerProstate cancer is the most abundant cancer in men, with over 200,000 expected new cases and around 28,000 deaths in 2012 in the US alone. In this study, the segmentation results for the prostate central gland (PCG) in MR scans are presented. The aim of this research study is to apply a graph-based algorithm to automated segmentation (i.e. delineation) of organ limits for the prostate central gland. The ultimate goal is to apply automated segmentation approach to facilitate efficient MR-guided biopsy and radiation treatment planning. The automated segmentation algorithm used is graph-driven based on a spherical template. Therefore, rays are sent through the surface points of a polyhedron to sample the graph's nodes. After graph construction--which only requires the center of the polyhedron defined by the user and located inside the prostate center gland--the minimal cost closed set on the graph is computed via a polynomial time s-t-cut, which results in the segmentation of the prostate center gland's boundaries and volume. The algorithm has been realized as a C++ module within the medical research platform MeVisLab and the ground truth of the central gland boundaries were manually extracted by clinical experts (interventional radiologists) with several years of experience in prostate treatment. For evaluation the automated segmentations of the proposed scheme have been compared with the manual segmentations, yielding an average Dice Similarity Coefficient (DSC) of 78.94 ± 10.85%.http://europepmc.org/articles/PMC3795743?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Jan Egger
spellingShingle Jan Egger
PCG-cut: graph driven segmentation of the prostate central gland.
PLoS ONE
author_facet Jan Egger
author_sort Jan Egger
title PCG-cut: graph driven segmentation of the prostate central gland.
title_short PCG-cut: graph driven segmentation of the prostate central gland.
title_full PCG-cut: graph driven segmentation of the prostate central gland.
title_fullStr PCG-cut: graph driven segmentation of the prostate central gland.
title_full_unstemmed PCG-cut: graph driven segmentation of the prostate central gland.
title_sort pcg-cut: graph driven segmentation of the prostate central gland.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2013-01-01
description Prostate cancer is the most abundant cancer in men, with over 200,000 expected new cases and around 28,000 deaths in 2012 in the US alone. In this study, the segmentation results for the prostate central gland (PCG) in MR scans are presented. The aim of this research study is to apply a graph-based algorithm to automated segmentation (i.e. delineation) of organ limits for the prostate central gland. The ultimate goal is to apply automated segmentation approach to facilitate efficient MR-guided biopsy and radiation treatment planning. The automated segmentation algorithm used is graph-driven based on a spherical template. Therefore, rays are sent through the surface points of a polyhedron to sample the graph's nodes. After graph construction--which only requires the center of the polyhedron defined by the user and located inside the prostate center gland--the minimal cost closed set on the graph is computed via a polynomial time s-t-cut, which results in the segmentation of the prostate center gland's boundaries and volume. The algorithm has been realized as a C++ module within the medical research platform MeVisLab and the ground truth of the central gland boundaries were manually extracted by clinical experts (interventional radiologists) with several years of experience in prostate treatment. For evaluation the automated segmentations of the proposed scheme have been compared with the manual segmentations, yielding an average Dice Similarity Coefficient (DSC) of 78.94 ± 10.85%.
url http://europepmc.org/articles/PMC3795743?pdf=render
work_keys_str_mv AT janegger pcgcutgraphdrivensegmentationoftheprostatecentralgland
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