Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi

Covalent modification of surfaces with carbohydrates (glycans) is a prerequisite for a variety of glycomics-based biomedical applications, including functional biomaterials, glycoarrays, and glycan-based biosensors. The chemistry of glycan immobilization plays an essential role in the bioavailabilit...

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Main Authors: Manish Dubey, Daniel M. Ratner, Jesse Burk-Rafel, Fang Cheng, Kathryn M. Bolles
Format: Article
Language:English
Published: MDPI AG 2010-07-01
Series:Materials
Subjects:
SPR
Online Access:http://www.mdpi.com/1996-1944/3/7/3948/
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spelling doaj-d7abce51c82a4c46a05978e4a40e1aa32020-11-24T21:37:21ZengMDPI AGMaterials1996-19442010-07-01373948396410.3390/ma3073948Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRiManish DubeyDaniel M. RatnerJesse Burk-RafelFang ChengKathryn M. BollesCovalent modification of surfaces with carbohydrates (glycans) is a prerequisite for a variety of glycomics-based biomedical applications, including functional biomaterials, glycoarrays, and glycan-based biosensors. The chemistry of glycan immobilization plays an essential role in the bioavailability and function of the surface bound carbohydrate moiety. However, the scarcity of analytical methods to characterize carbohydrate-modified surfaces complicates efforts to optimize glycan surface chemistries for specific applications. Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) is a surface sensitive technique suited for probing molecular composition at the biomaterial interface. Expanding ToF-SIMS analysis to interrogate carbohydrate-modified materials would increase our understanding of glycan surface chemistries and advance novel tools in the nascent field of glycomics. In this study, a printed glycan microarray surface was fabricated and subsequently characterized by ToF-SIMS imaging analysis. A multivariate technique based on principal component analysis (PCA) was used to analyze the ToF-SIMS dataset and reconstruct ToF-SIMS images of functionalized surfaces. These images reveal chemical species related to the immobilized glycan, underlying glycan-reactive chemistries, gold substrates, and outside contaminants. Printed glycoarray elements (spots) were also interrogated to resolve the spatial distribution and spot homogeneity of immobilized glycan. The bioavailability of the surface-bound glycan was validated using a specific carbohydrate-binding protein (lectin) as characterized by Surface Plasmon Resonance Imaging (SPRi). Our results demonstrate that ToF-SIMS is capable of characterizing chemical features of carbohydrate-modified surfaces and, when complemented with SPRi, can play an enabling role in optimizing glycan microarray fabrication and performance. http://www.mdpi.com/1996-1944/3/7/3948/carbohydrate microarrayToF-SIMSSPRglycomics
collection DOAJ
language English
format Article
sources DOAJ
author Manish Dubey
Daniel M. Ratner
Jesse Burk-Rafel
Fang Cheng
Kathryn M. Bolles
spellingShingle Manish Dubey
Daniel M. Ratner
Jesse Burk-Rafel
Fang Cheng
Kathryn M. Bolles
Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi
Materials
carbohydrate microarray
ToF-SIMS
SPR
glycomics
author_facet Manish Dubey
Daniel M. Ratner
Jesse Burk-Rafel
Fang Cheng
Kathryn M. Bolles
author_sort Manish Dubey
title Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi
title_short Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi
title_full Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi
title_fullStr Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi
title_full_unstemmed Imaging Analysis of Carbohydrate-Modified Surfaces Using ToF-SIMS and SPRi
title_sort imaging analysis of carbohydrate-modified surfaces using tof-sims and spri
publisher MDPI AG
series Materials
issn 1996-1944
publishDate 2010-07-01
description Covalent modification of surfaces with carbohydrates (glycans) is a prerequisite for a variety of glycomics-based biomedical applications, including functional biomaterials, glycoarrays, and glycan-based biosensors. The chemistry of glycan immobilization plays an essential role in the bioavailability and function of the surface bound carbohydrate moiety. However, the scarcity of analytical methods to characterize carbohydrate-modified surfaces complicates efforts to optimize glycan surface chemistries for specific applications. Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) is a surface sensitive technique suited for probing molecular composition at the biomaterial interface. Expanding ToF-SIMS analysis to interrogate carbohydrate-modified materials would increase our understanding of glycan surface chemistries and advance novel tools in the nascent field of glycomics. In this study, a printed glycan microarray surface was fabricated and subsequently characterized by ToF-SIMS imaging analysis. A multivariate technique based on principal component analysis (PCA) was used to analyze the ToF-SIMS dataset and reconstruct ToF-SIMS images of functionalized surfaces. These images reveal chemical species related to the immobilized glycan, underlying glycan-reactive chemistries, gold substrates, and outside contaminants. Printed glycoarray elements (spots) were also interrogated to resolve the spatial distribution and spot homogeneity of immobilized glycan. The bioavailability of the surface-bound glycan was validated using a specific carbohydrate-binding protein (lectin) as characterized by Surface Plasmon Resonance Imaging (SPRi). Our results demonstrate that ToF-SIMS is capable of characterizing chemical features of carbohydrate-modified surfaces and, when complemented with SPRi, can play an enabling role in optimizing glycan microarray fabrication and performance.
topic carbohydrate microarray
ToF-SIMS
SPR
glycomics
url http://www.mdpi.com/1996-1944/3/7/3948/
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