Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level

Accessing a plant’s 3D geometry has become of significant importance for phenotyping during the last few years. Close-up laser scanning is an established method to acquire 3D plant shapes in real time with high detail, but it is stationary and has high investment costs. 3D reconstruction from images...

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Main Authors: Johann Christian Rose, Stefan Paulus, Heiner Kuhlmann
Format: Article
Language:English
Published: MDPI AG 2015-04-01
Series:Sensors
Subjects:
Online Access:http://www.mdpi.com/1424-8220/15/5/9651
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spelling doaj-d701ac39bf8142b9974c4ac8f2d5c82f2020-11-25T00:46:41ZengMDPI AGSensors1424-82202015-04-011559651966510.3390/s150509651s150509651Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ LevelJohann Christian Rose0Stefan Paulus1Heiner Kuhlmann2Department of Geodesy, Institute of Geodesy and Geoinformation, University of Bonn, Nussallee 17, 53115 Bonn, GermanyDepartment of Geodesy, Institute of Geodesy and Geoinformation, University of Bonn, Nussallee 17, 53115 Bonn, GermanyDepartment of Geodesy, Institute of Geodesy and Geoinformation, University of Bonn, Nussallee 17, 53115 Bonn, GermanyAccessing a plant’s 3D geometry has become of significant importance for phenotyping during the last few years. Close-up laser scanning is an established method to acquire 3D plant shapes in real time with high detail, but it is stationary and has high investment costs. 3D reconstruction from images using structure from motion (SfM) and multi-view stereo (MVS) is a flexible cost-effective method, but requires post-processing procedures. The aim of this study is to evaluate the potential measuring accuracy of an SfM- and MVS-based photogrammetric method for the task of organ-level plant phenotyping. For this, reference data are provided by a high-accuracy close-up laser scanner. Using both methods, point clouds of several tomato plants were reconstructed at six following days. The parameters leaf area, main stem height and convex hull of the complete plant were extracted from the 3D point clouds and compared to the reference data regarding accuracy and correlation. These parameters were chosen regarding the demands of current phenotyping scenarios. The study shows that the photogrammetric approach is highly suitable for the presented monitoring scenario, yielding high correlations to the reference measurements. This cost-effective 3D reconstruction method depicts an alternative to an expensive laser scanner in the studied scenarios with potential for automated procedures.http://www.mdpi.com/1424-8220/15/5/9651SfM and MVS photogrammetryclose-up laser scanningplant phenotypingorgan-level parameterization
collection DOAJ
language English
format Article
sources DOAJ
author Johann Christian Rose
Stefan Paulus
Heiner Kuhlmann
spellingShingle Johann Christian Rose
Stefan Paulus
Heiner Kuhlmann
Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level
Sensors
SfM and MVS photogrammetry
close-up laser scanning
plant phenotyping
organ-level parameterization
author_facet Johann Christian Rose
Stefan Paulus
Heiner Kuhlmann
author_sort Johann Christian Rose
title Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level
title_short Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level
title_full Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level
title_fullStr Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level
title_full_unstemmed Accuracy Analysis of a Multi-View Stereo Approach for Phenotyping of Tomato Plants at the Organ Level
title_sort accuracy analysis of a multi-view stereo approach for phenotyping of tomato plants at the organ level
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2015-04-01
description Accessing a plant’s 3D geometry has become of significant importance for phenotyping during the last few years. Close-up laser scanning is an established method to acquire 3D plant shapes in real time with high detail, but it is stationary and has high investment costs. 3D reconstruction from images using structure from motion (SfM) and multi-view stereo (MVS) is a flexible cost-effective method, but requires post-processing procedures. The aim of this study is to evaluate the potential measuring accuracy of an SfM- and MVS-based photogrammetric method for the task of organ-level plant phenotyping. For this, reference data are provided by a high-accuracy close-up laser scanner. Using both methods, point clouds of several tomato plants were reconstructed at six following days. The parameters leaf area, main stem height and convex hull of the complete plant were extracted from the 3D point clouds and compared to the reference data regarding accuracy and correlation. These parameters were chosen regarding the demands of current phenotyping scenarios. The study shows that the photogrammetric approach is highly suitable for the presented monitoring scenario, yielding high correlations to the reference measurements. This cost-effective 3D reconstruction method depicts an alternative to an expensive laser scanner in the studied scenarios with potential for automated procedures.
topic SfM and MVS photogrammetry
close-up laser scanning
plant phenotyping
organ-level parameterization
url http://www.mdpi.com/1424-8220/15/5/9651
work_keys_str_mv AT johannchristianrose accuracyanalysisofamultiviewstereoapproachforphenotypingoftomatoplantsattheorganlevel
AT stefanpaulus accuracyanalysisofamultiviewstereoapproachforphenotypingoftomatoplantsattheorganlevel
AT heinerkuhlmann accuracyanalysisofamultiviewstereoapproachforphenotypingoftomatoplantsattheorganlevel
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