Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study

With the increasing daily workload of physicians, computer-aided diagnosis (CAD) systems based on deep learning play an increasingly important role in pattern recognition of diagnostic medical images. In this paper, we propose a framework based on hierarchical convolutional neural networks (CNNs) fo...

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Main Authors: Jiarong Zhou, Wenzhe Wang, Biwen Lei, Wenhao Ge, Yu Huang, Linshi Zhang, Yingcai Yan, Dongkai Zhou, Yuan Ding, Jian Wu, Weilin Wang
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-01-01
Series:Frontiers in Oncology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fonc.2020.581210/full
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record_format Article
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language English
format Article
sources DOAJ
author Jiarong Zhou
Jiarong Zhou
Wenzhe Wang
Biwen Lei
Wenhao Ge
Wenhao Ge
Yu Huang
Yu Huang
Linshi Zhang
Linshi Zhang
Yingcai Yan
Yingcai Yan
Dongkai Zhou
Dongkai Zhou
Yuan Ding
Yuan Ding
Yuan Ding
Yuan Ding
Yuan Ding
Jian Wu
Weilin Wang
Weilin Wang
Weilin Wang
Weilin Wang
Weilin Wang
spellingShingle Jiarong Zhou
Jiarong Zhou
Wenzhe Wang
Biwen Lei
Wenhao Ge
Wenhao Ge
Yu Huang
Yu Huang
Linshi Zhang
Linshi Zhang
Yingcai Yan
Yingcai Yan
Dongkai Zhou
Dongkai Zhou
Yuan Ding
Yuan Ding
Yuan Ding
Yuan Ding
Yuan Ding
Jian Wu
Weilin Wang
Weilin Wang
Weilin Wang
Weilin Wang
Weilin Wang
Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study
Frontiers in Oncology
deep learning
focal liver lesions
detection
classification
computed tomography
author_facet Jiarong Zhou
Jiarong Zhou
Wenzhe Wang
Biwen Lei
Wenhao Ge
Wenhao Ge
Yu Huang
Yu Huang
Linshi Zhang
Linshi Zhang
Yingcai Yan
Yingcai Yan
Dongkai Zhou
Dongkai Zhou
Yuan Ding
Yuan Ding
Yuan Ding
Yuan Ding
Yuan Ding
Jian Wu
Weilin Wang
Weilin Wang
Weilin Wang
Weilin Wang
Weilin Wang
author_sort Jiarong Zhou
title Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study
title_short Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study
title_full Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study
title_fullStr Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study
title_full_unstemmed Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary Study
title_sort automatic detection and classification of focal liver lesions based on deep convolutional neural networks: a preliminary study
publisher Frontiers Media S.A.
series Frontiers in Oncology
issn 2234-943X
publishDate 2021-01-01
description With the increasing daily workload of physicians, computer-aided diagnosis (CAD) systems based on deep learning play an increasingly important role in pattern recognition of diagnostic medical images. In this paper, we propose a framework based on hierarchical convolutional neural networks (CNNs) for automatic detection and classification of focal liver lesions (FLLs) in multi-phasic computed tomography (CT). A total of 616 nodules, composed of three types of malignant lesions (hepatocellular carcinoma, intrahepatic cholangiocarcinoma, and metastasis) and benign lesions (hemangioma, focal nodular hyperplasia, and cyst), were randomly divided into training and test sets at an approximate ratio of 3:1. To evaluate the performance of our model, other commonly adopted CNN models and two physicians were included for comparison. Our model achieved the best results to detect FLLs, with an average test precision of 82.8%, recall of 93.4%, and F1-score of 87.8%. Our model initially classified FLLs into malignant and benign and then classified them into more detailed classes. For the binary and six-class classification, our model achieved average accuracy results of 82.5 and73.4%, respectively, which were better than the other three classification neural networks. Interestingly, the classification performance of the model was placed between a junior physician and a senior physician. Overall, this preliminary study demonstrates that our proposed multi-modality and multi-scale CNN structure can locate and classify FLLs accurately in a limited dataset, and would help inexperienced physicians to reach a diagnosis in clinical practice.
topic deep learning
focal liver lesions
detection
classification
computed tomography
url https://www.frontiersin.org/articles/10.3389/fonc.2020.581210/full
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spelling doaj-d5dc5cd04ec4494a9924953d499576942021-01-29T05:40:44ZengFrontiers Media S.A.Frontiers in Oncology2234-943X2021-01-011010.3389/fonc.2020.581210581210Automatic Detection and Classification of Focal Liver Lesions Based on Deep Convolutional Neural Networks: A Preliminary StudyJiarong Zhou0Jiarong Zhou1Wenzhe Wang2Biwen Lei3Wenhao Ge4Wenhao Ge5Yu Huang6Yu Huang7Linshi Zhang8Linshi Zhang9Yingcai Yan10Yingcai Yan11Dongkai Zhou12Dongkai Zhou13Yuan Ding14Yuan Ding15Yuan Ding16Yuan Ding17Yuan Ding18Jian Wu19Weilin Wang20Weilin Wang21Weilin Wang22Weilin Wang23Weilin Wang24Department of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaCollege of Computer Science and Technology, Zhejiang University, Hangzhou, ChinaCollege of Computer Science and Technology, Zhejiang University, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaClinical Medicine Innovation Center of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Diseases of Zhejiang University, Hangzhou, ChinaClinical Research Center of Hepatobiliary and Pancreatic Diseases of Zhejiang Province, Hangzhou, ChinaResearch Center of Diagnosis and Treatment Technology for Hepatocellular Carcinoma of Zhejiang Province, Hangzhou, ChinaCollege of Computer Science and Technology, Zhejiang University, Hangzhou, ChinaDepartment of Hepatobiliary and Pancreatic Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, ChinaKey Laboratory of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Tumor of Zhejiang Province, Hangzhou, ChinaClinical Medicine Innovation Center of Precision Diagnosis and Treatment for Hepatobiliary and Pancreatic Diseases of Zhejiang University, Hangzhou, ChinaClinical Research Center of Hepatobiliary and Pancreatic Diseases of Zhejiang Province, Hangzhou, ChinaResearch Center of Diagnosis and Treatment Technology for Hepatocellular Carcinoma of Zhejiang Province, Hangzhou, ChinaWith the increasing daily workload of physicians, computer-aided diagnosis (CAD) systems based on deep learning play an increasingly important role in pattern recognition of diagnostic medical images. In this paper, we propose a framework based on hierarchical convolutional neural networks (CNNs) for automatic detection and classification of focal liver lesions (FLLs) in multi-phasic computed tomography (CT). A total of 616 nodules, composed of three types of malignant lesions (hepatocellular carcinoma, intrahepatic cholangiocarcinoma, and metastasis) and benign lesions (hemangioma, focal nodular hyperplasia, and cyst), were randomly divided into training and test sets at an approximate ratio of 3:1. To evaluate the performance of our model, other commonly adopted CNN models and two physicians were included for comparison. Our model achieved the best results to detect FLLs, with an average test precision of 82.8%, recall of 93.4%, and F1-score of 87.8%. Our model initially classified FLLs into malignant and benign and then classified them into more detailed classes. For the binary and six-class classification, our model achieved average accuracy results of 82.5 and73.4%, respectively, which were better than the other three classification neural networks. Interestingly, the classification performance of the model was placed between a junior physician and a senior physician. Overall, this preliminary study demonstrates that our proposed multi-modality and multi-scale CNN structure can locate and classify FLLs accurately in a limited dataset, and would help inexperienced physicians to reach a diagnosis in clinical practice.https://www.frontiersin.org/articles/10.3389/fonc.2020.581210/fulldeep learningfocal liver lesionsdetectionclassificationcomputed tomography