Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia

The development of novel markers usually requires high costs and is time consuming. Instead of developing new markers, their transfer within a genus is an alternative particularly suitable in less studied species. Hence the goal of this study was to evaluate the ability of SSR markers, previously de...

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Main Authors: Rajković Dragana, Taški-Ajduković Ksenija, Nagl Nevena, Isakov Milada, Milić Dragan, Karagić Đura, Mikić Aleksandar
Format: Article
Language:English
Published: Institute of field and vegetable crops, Novi Sad 2015-01-01
Series:Ratarstvo i Povrtarstvo
Subjects:
Online Access:http://scindeks-clanci.ceon.rs/data/pdf/1821-3944/2015/1821-39441502085R.pdf
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spelling doaj-d5521f63c1ae46469112c465e8e41daf2020-11-24T23:03:22ZengInstitute of field and vegetable crops, Novi SadRatarstvo i Povrtarstvo1821-39442217-83922015-01-01522858910.5937/ratpov52-80081821-39441502085RPotential use of SSR and ISSR markers in estimation of DNA polymorphism within genus ViciaRajković Dragana0Taški-Ajduković Ksenija1Nagl Nevena2Isakov Milada3Milić Dragan4Karagić Đura5Mikić Aleksandar6Crop and Vegetable Scientific Institute, Novi Sad, SerbiaCrop and Vegetable Scientific Institute, Novi Sad, SerbiaCrop and Vegetable Scientific Institute, Novi Sad, SerbiaCrop and Vegetable Scientific Institute, Novi Sad, SerbiaCrop and Vegetable Scientific Institute, Novi Sad, SerbiaCrop and Vegetable Scientific Institute, Novi Sad, SerbiaCrop and Vegetable Scientific Institute, Novi Sad, SerbiaThe development of novel markers usually requires high costs and is time consuming. Instead of developing new markers, their transfer within a genus is an alternative particularly suitable in less studied species. Hence the goal of this study was to evaluate the ability of SSR markers, previously developed from Vicia faba, and ISSR markers to estimate DNA polymorphism within the genus Vicia. Eight Vicia species were used for cross-species amplification. Transferability of SSR markers in the studied species ranged from 25% to 100%, with an average of 56.25%. Although three SSR primers were polymorphic, the nature of the amplification products indicated that their further usefulness is questionable. ISSR primers generated polymorphic products of amplification in all tested Vicia species. The average polymorphism of ISSR primers was 93.75%, which implies that these primers can be used within the genus Vicia.http://scindeks-clanci.ceon.rs/data/pdf/1821-3944/2015/1821-39441502085R.pdfDNA polymorphismISSRsmolecular markersSSRsVicia
collection DOAJ
language English
format Article
sources DOAJ
author Rajković Dragana
Taški-Ajduković Ksenija
Nagl Nevena
Isakov Milada
Milić Dragan
Karagić Đura
Mikić Aleksandar
spellingShingle Rajković Dragana
Taški-Ajduković Ksenija
Nagl Nevena
Isakov Milada
Milić Dragan
Karagić Đura
Mikić Aleksandar
Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia
Ratarstvo i Povrtarstvo
DNA polymorphism
ISSRs
molecular markers
SSRs
Vicia
author_facet Rajković Dragana
Taški-Ajduković Ksenija
Nagl Nevena
Isakov Milada
Milić Dragan
Karagić Đura
Mikić Aleksandar
author_sort Rajković Dragana
title Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia
title_short Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia
title_full Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia
title_fullStr Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia
title_full_unstemmed Potential use of SSR and ISSR markers in estimation of DNA polymorphism within genus Vicia
title_sort potential use of ssr and issr markers in estimation of dna polymorphism within genus vicia
publisher Institute of field and vegetable crops, Novi Sad
series Ratarstvo i Povrtarstvo
issn 1821-3944
2217-8392
publishDate 2015-01-01
description The development of novel markers usually requires high costs and is time consuming. Instead of developing new markers, their transfer within a genus is an alternative particularly suitable in less studied species. Hence the goal of this study was to evaluate the ability of SSR markers, previously developed from Vicia faba, and ISSR markers to estimate DNA polymorphism within the genus Vicia. Eight Vicia species were used for cross-species amplification. Transferability of SSR markers in the studied species ranged from 25% to 100%, with an average of 56.25%. Although three SSR primers were polymorphic, the nature of the amplification products indicated that their further usefulness is questionable. ISSR primers generated polymorphic products of amplification in all tested Vicia species. The average polymorphism of ISSR primers was 93.75%, which implies that these primers can be used within the genus Vicia.
topic DNA polymorphism
ISSRs
molecular markers
SSRs
Vicia
url http://scindeks-clanci.ceon.rs/data/pdf/1821-3944/2015/1821-39441502085R.pdf
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