OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs

A group-sequential clinical trial design is one in which interim analyses of the data are conducted after groups of patients are recruited. After each interim analysis, the trial may stop early if the evidence so far shows the new treatment is particularly effective or ineffective. Such designs are...

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Main Author: James Wason
Format: Article
Language:English
Published: Foundation for Open Access Statistics 2015-08-01
Series:Journal of Statistical Software
Online Access:http://www.jstatsoft.org/index.php/jss/article/view/2269
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spelling doaj-d49b45a240224112a3669b615c5509f92020-11-24T21:06:56ZengFoundation for Open Access StatisticsJournal of Statistical Software1548-76602015-08-0166111310.18637/jss.v066.i02873OptGS: An R Package for Finding Near-Optimal Group-Sequential DesignsJames WasonA group-sequential clinical trial design is one in which interim analyses of the data are conducted after groups of patients are recruited. After each interim analysis, the trial may stop early if the evidence so far shows the new treatment is particularly effective or ineffective. Such designs are ethical and cost-effective, and so are of great interest in practice. An optimal group-sequential design is one which controls the type-I error rate and power at a specified level, but minimizes the expected sample size of the trial when the true treatment effect is equal to some specified value. Searching for an optimal group- sequential design is a significant computational challenge because of the high number of parameters. In this paper the R package OptGS is described. Package OptGS searches for near-optimal and balanced (i.e., one which balances more than one optimality criterion) group-sequential designs for randomized controlled trials with normally distributed outcomes. Package OptGS uses a two-parameter family of functions to determine the stopping boundaries, which improves the speed of the search process whilst still allow- ing flexibility in the possible shape of stopping boundaries. The resulting package allows optimal designs to be found in a matter of seconds much faster than a previous approach.http://www.jstatsoft.org/index.php/jss/article/view/2269
collection DOAJ
language English
format Article
sources DOAJ
author James Wason
spellingShingle James Wason
OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs
Journal of Statistical Software
author_facet James Wason
author_sort James Wason
title OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs
title_short OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs
title_full OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs
title_fullStr OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs
title_full_unstemmed OptGS: An R Package for Finding Near-Optimal Group-Sequential Designs
title_sort optgs: an r package for finding near-optimal group-sequential designs
publisher Foundation for Open Access Statistics
series Journal of Statistical Software
issn 1548-7660
publishDate 2015-08-01
description A group-sequential clinical trial design is one in which interim analyses of the data are conducted after groups of patients are recruited. After each interim analysis, the trial may stop early if the evidence so far shows the new treatment is particularly effective or ineffective. Such designs are ethical and cost-effective, and so are of great interest in practice. An optimal group-sequential design is one which controls the type-I error rate and power at a specified level, but minimizes the expected sample size of the trial when the true treatment effect is equal to some specified value. Searching for an optimal group- sequential design is a significant computational challenge because of the high number of parameters. In this paper the R package OptGS is described. Package OptGS searches for near-optimal and balanced (i.e., one which balances more than one optimality criterion) group-sequential designs for randomized controlled trials with normally distributed outcomes. Package OptGS uses a two-parameter family of functions to determine the stopping boundaries, which improves the speed of the search process whilst still allow- ing flexibility in the possible shape of stopping boundaries. The resulting package allows optimal designs to be found in a matter of seconds much faster than a previous approach.
url http://www.jstatsoft.org/index.php/jss/article/view/2269
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