State-dependent geometry of population activity in rat auditory cortex
The accuracy of the neural code depends on the relative embedding of signal and noise in the activity of neural populations. Despite a wealth of theoretical work on population codes, there are few empirical characterizations of the high-dimensional signal and noise subspaces. We studied the geometry...
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doaj-d4513e583d6148e0a300f22cc8b2c7882021-05-05T17:32:01ZengeLife Sciences Publications LtdeLife2050-084X2019-04-01810.7554/eLife.44526State-dependent geometry of population activity in rat auditory cortexDmitry Kobak0https://orcid.org/0000-0002-5639-7209Jose L Pardo-Vazquez1https://orcid.org/0000-0003-4623-2440Mafalda Valente2https://orcid.org/0000-0002-1824-0462Christian K Machens3https://orcid.org/0000-0003-1717-1562Alfonso Renart4https://orcid.org/0000-0001-7916-9930Champalimaud Center for the Unknown, Lisbon, Portugal; Institute for Ophthalmic Research, University of Tübingen, Tübingen, GermanyChampalimaud Center for the Unknown, Lisbon, Portugal; Neuroscience and Motor Control Group, University of A Coruña, Coruña, SpainChampalimaud Center for the Unknown, Lisbon, PortugalChampalimaud Center for the Unknown, Lisbon, PortugalChampalimaud Center for the Unknown, Lisbon, PortugalThe accuracy of the neural code depends on the relative embedding of signal and noise in the activity of neural populations. Despite a wealth of theoretical work on population codes, there are few empirical characterizations of the high-dimensional signal and noise subspaces. We studied the geometry of population codes in the rat auditory cortex across brain states along the activation-inactivation continuum, using sounds varying in difference and mean level across the ears. As the cortex becomes more activated, single-hemisphere populations go from preferring contralateral loud sounds to a symmetric preference across lateralizations and intensities, gain-modulation effectively disappears, and the signal and noise subspaces become approximately orthogonal to each other and to the direction corresponding to global activity modulations. Level-invariant decoding of sound lateralization also becomes possible in the active state. Our results provide an empirical foundation for the geometry and state-dependence of cortical population codes.https://elifesciences.org/articles/44526auditory cortexpopulation activitycortical state |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Dmitry Kobak Jose L Pardo-Vazquez Mafalda Valente Christian K Machens Alfonso Renart |
spellingShingle |
Dmitry Kobak Jose L Pardo-Vazquez Mafalda Valente Christian K Machens Alfonso Renart State-dependent geometry of population activity in rat auditory cortex eLife auditory cortex population activity cortical state |
author_facet |
Dmitry Kobak Jose L Pardo-Vazquez Mafalda Valente Christian K Machens Alfonso Renart |
author_sort |
Dmitry Kobak |
title |
State-dependent geometry of population activity in rat auditory cortex |
title_short |
State-dependent geometry of population activity in rat auditory cortex |
title_full |
State-dependent geometry of population activity in rat auditory cortex |
title_fullStr |
State-dependent geometry of population activity in rat auditory cortex |
title_full_unstemmed |
State-dependent geometry of population activity in rat auditory cortex |
title_sort |
state-dependent geometry of population activity in rat auditory cortex |
publisher |
eLife Sciences Publications Ltd |
series |
eLife |
issn |
2050-084X |
publishDate |
2019-04-01 |
description |
The accuracy of the neural code depends on the relative embedding of signal and noise in the activity of neural populations. Despite a wealth of theoretical work on population codes, there are few empirical characterizations of the high-dimensional signal and noise subspaces. We studied the geometry of population codes in the rat auditory cortex across brain states along the activation-inactivation continuum, using sounds varying in difference and mean level across the ears. As the cortex becomes more activated, single-hemisphere populations go from preferring contralateral loud sounds to a symmetric preference across lateralizations and intensities, gain-modulation effectively disappears, and the signal and noise subspaces become approximately orthogonal to each other and to the direction corresponding to global activity modulations. Level-invariant decoding of sound lateralization also becomes possible in the active state. Our results provide an empirical foundation for the geometry and state-dependence of cortical population codes. |
topic |
auditory cortex population activity cortical state |
url |
https://elifesciences.org/articles/44526 |
work_keys_str_mv |
AT dmitrykobak statedependentgeometryofpopulationactivityinratauditorycortex AT joselpardovazquez statedependentgeometryofpopulationactivityinratauditorycortex AT mafaldavalente statedependentgeometryofpopulationactivityinratauditorycortex AT christiankmachens statedependentgeometryofpopulationactivityinratauditorycortex AT alfonsorenart statedependentgeometryofpopulationactivityinratauditorycortex |
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