Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens

Natural pathogen pressure is an important factor that shapes the host immune defense mechanism. The current study primarily aimed to explore the molecular basis of the natural immune defense mechanism of a sporadic pest, <i>Gryllus bimaculatus</i>, during swarming by constructing cDNA li...

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Main Authors: Abid Hussain, Muhammad Waqar Ali, Ahmed Mohammed AlJabr, Saad Naser AL-Kahtani
Format: Article
Language:English
Published: MDPI AG 2020-10-01
Series:Journal of Fungi
Subjects:
Online Access:https://www.mdpi.com/2309-608X/6/4/232
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spelling doaj-d44a1fb68975404084652cbdaae13ac42020-11-25T03:57:46ZengMDPI AGJournal of Fungi2309-608X2020-10-01623223210.3390/jof6040232Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading PathogensAbid Hussain0Muhammad Waqar Ali1Ahmed Mohammed AlJabr2Saad Naser AL-Kahtani3Laboratory of Bio-Control and Molecular Biology, Department of Arid Land Agriculture, College of Agricultural and Food Sciences, King Faisal University, Hofuf 31982, Saudi ArabiaInstitute of Fruit and Tea, Hubei Academy of Agricultural Sciences, Wuhan 430064, ChinaLaboratory of Bio-Control and Molecular Biology, Department of Arid Land Agriculture, College of Agricultural and Food Sciences, King Faisal University, Hofuf 31982, Saudi ArabiaLaboratory of Bio-Control and Molecular Biology, Department of Arid Land Agriculture, College of Agricultural and Food Sciences, King Faisal University, Hofuf 31982, Saudi ArabiaNatural pathogen pressure is an important factor that shapes the host immune defense mechanism. The current study primarily aimed to explore the molecular basis of the natural immune defense mechanism of a sporadic pest, <i>Gryllus bimaculatus</i>, during swarming by constructing cDNA libraries of the female mid-gut, male mid-gut, testes, and ovaries. The Illumina HiSeq platform generated an average of 7.9 G, 11.77 G, 10.07 G, and 10.07 G bases of outputs from the male mid-gut, female mid-gut, testes, and ovaries and libraries, respectively. The transcriptome of two-spotted field crickets was assembled into 233,172 UniGenes, which yielded approximately 163.58 million reads. On the other hand, there were 43,055 genes in common that were shared among all the biological samples. Gene Ontology analysis successfully annotated 492 immune-related genes, which comprised mainly Pattern Recognition Receptors (62 genes), Signal modulators (57 genes), Signal transduction (214 genes), Effectors (36 genes), and another immune-related 123 genes. In summary, the identified wide range of immune-related genes from <i>G. bimaculatus</i> indicates the existence of a sophisticated and specialized broad spectrum immune mechanism against invading pathogens, which provides, for the first time, insights into the molecular mechanism of disease resistance among two-spotted field crickets.https://www.mdpi.com/2309-608X/6/4/232antimicrobial peptidesgenomicshost defenseimmunitynext generation sequencingtranscriptome
collection DOAJ
language English
format Article
sources DOAJ
author Abid Hussain
Muhammad Waqar Ali
Ahmed Mohammed AlJabr
Saad Naser AL-Kahtani
spellingShingle Abid Hussain
Muhammad Waqar Ali
Ahmed Mohammed AlJabr
Saad Naser AL-Kahtani
Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens
Journal of Fungi
antimicrobial peptides
genomics
host defense
immunity
next generation sequencing
transcriptome
author_facet Abid Hussain
Muhammad Waqar Ali
Ahmed Mohammed AlJabr
Saad Naser AL-Kahtani
author_sort Abid Hussain
title Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens
title_short Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens
title_full Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens
title_fullStr Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens
title_full_unstemmed Insights into the <i>Gryllus bimaculatus</i> Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens
title_sort insights into the <i>gryllus bimaculatus</i> immune-related transcriptomic profiling to combat naturally invading pathogens
publisher MDPI AG
series Journal of Fungi
issn 2309-608X
publishDate 2020-10-01
description Natural pathogen pressure is an important factor that shapes the host immune defense mechanism. The current study primarily aimed to explore the molecular basis of the natural immune defense mechanism of a sporadic pest, <i>Gryllus bimaculatus</i>, during swarming by constructing cDNA libraries of the female mid-gut, male mid-gut, testes, and ovaries. The Illumina HiSeq platform generated an average of 7.9 G, 11.77 G, 10.07 G, and 10.07 G bases of outputs from the male mid-gut, female mid-gut, testes, and ovaries and libraries, respectively. The transcriptome of two-spotted field crickets was assembled into 233,172 UniGenes, which yielded approximately 163.58 million reads. On the other hand, there were 43,055 genes in common that were shared among all the biological samples. Gene Ontology analysis successfully annotated 492 immune-related genes, which comprised mainly Pattern Recognition Receptors (62 genes), Signal modulators (57 genes), Signal transduction (214 genes), Effectors (36 genes), and another immune-related 123 genes. In summary, the identified wide range of immune-related genes from <i>G. bimaculatus</i> indicates the existence of a sophisticated and specialized broad spectrum immune mechanism against invading pathogens, which provides, for the first time, insights into the molecular mechanism of disease resistance among two-spotted field crickets.
topic antimicrobial peptides
genomics
host defense
immunity
next generation sequencing
transcriptome
url https://www.mdpi.com/2309-608X/6/4/232
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