Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution
Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has...
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doaj-d41ad7ac56824548893512f2efd6c4732020-11-25T04:08:22ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672020-11-01218668866810.3390/ijms21228668Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme EvolutionSeung-Gyun Woo0Seong Keun Kim1Baek-Rock Oh2Seung-Goo Lee3Dae-Hee Lee4Synthetic Biology and Bioengineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, KoreaSynthetic Biology and Bioengineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, KoreaMicrobial Biotechnology Research Center, Jeonbuk Branch Institute, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup 56212, KoreaSynthetic Biology and Bioengineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, KoreaSynthetic Biology and Bioengineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, KoreaLysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has not been reported. Here, we present a lysozyme screening system using a genetically encoded biosensor. We first cloned bacteriophage T4 lysozyme (T4L) into a plasmid under control of the <i>araBAD</i> promoter. The plasmid was expressed in <i>Escherichia coli</i> with no toxic effects on growth. Next, we observed that increased soluble T4L expression decreased the fluorescence produced by the genetic enzyme screening system. To investigate T4L evolution based on this finding, we generated a T4L random mutation library, which was screened using the genetic enzyme screening system. Finally, we identified two T4L variants showing 1.4-fold enhanced lytic activity compared to native T4L. To our knowledge, this is the first report describing the use of a genetically encoded biosensor to investigate bacteriophage T4L evolution. Our approach can be used to investigate the evolution of other lysozymes, which will expand the applications of lysozyme.https://www.mdpi.com/1422-0067/21/22/8668bacteriophage T4 lysozymegenetically encoded biosensordirected evolution |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Seung-Gyun Woo Seong Keun Kim Baek-Rock Oh Seung-Goo Lee Dae-Hee Lee |
spellingShingle |
Seung-Gyun Woo Seong Keun Kim Baek-Rock Oh Seung-Goo Lee Dae-Hee Lee Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution International Journal of Molecular Sciences bacteriophage T4 lysozyme genetically encoded biosensor directed evolution |
author_facet |
Seung-Gyun Woo Seong Keun Kim Baek-Rock Oh Seung-Goo Lee Dae-Hee Lee |
author_sort |
Seung-Gyun Woo |
title |
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_short |
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_full |
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_fullStr |
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_full_unstemmed |
Genetically Encoded Biosensor-Based Screening for Directed Bacteriophage T4 Lysozyme Evolution |
title_sort |
genetically encoded biosensor-based screening for directed bacteriophage t4 lysozyme evolution |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1661-6596 1422-0067 |
publishDate |
2020-11-01 |
description |
Lysozyme is widely used as a model protein in studies of structure–function relationships. Recently, lysozyme has gained attention for use in accelerating the degradation of secondary sludge, which mainly consists of bacteria. However, a high-throughput screening system for lysozyme engineering has not been reported. Here, we present a lysozyme screening system using a genetically encoded biosensor. We first cloned bacteriophage T4 lysozyme (T4L) into a plasmid under control of the <i>araBAD</i> promoter. The plasmid was expressed in <i>Escherichia coli</i> with no toxic effects on growth. Next, we observed that increased soluble T4L expression decreased the fluorescence produced by the genetic enzyme screening system. To investigate T4L evolution based on this finding, we generated a T4L random mutation library, which was screened using the genetic enzyme screening system. Finally, we identified two T4L variants showing 1.4-fold enhanced lytic activity compared to native T4L. To our knowledge, this is the first report describing the use of a genetically encoded biosensor to investigate bacteriophage T4L evolution. Our approach can be used to investigate the evolution of other lysozymes, which will expand the applications of lysozyme. |
topic |
bacteriophage T4 lysozyme genetically encoded biosensor directed evolution |
url |
https://www.mdpi.com/1422-0067/21/22/8668 |
work_keys_str_mv |
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