Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis

Despite increasing reports on the function of CCCH zinc finger proteins in plant development and stress response, the functions and molecular aspects of many non-tandem CCCH zinc finger (non-TZF) proteins remain uncharacterized. AtC3H59/ZFWD3 is an Arabidopsis non-TZF protein and belongs to the ZFWD...

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Main Authors: Hye-Yeon Seok, Hyungjoon Bae, Taehyoung Kim, Syed Muhammad Muntazir Mehdi, Linh Vu Nguyen, Sun-Young Lee, Yong-Hwan Moon
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/9/4738
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spelling doaj-d1da3083efa448aba328b7b50d6fba882021-04-29T23:06:08ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-04-01224738473810.3390/ijms22094738Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in ArabidopsisHye-Yeon Seok0Hyungjoon Bae1Taehyoung Kim2Syed Muhammad Muntazir Mehdi3Linh Vu Nguyen4Sun-Young Lee5Yong-Hwan Moon6Institute of Systems Biology, Pusan National University, Busan 46241, KoreaInstitute of Systems Biology, Pusan National University, Busan 46241, KoreaDepartment of Integrated Biological Science, Pusan National University, Busan 46241, KoreaDepartment of Integrated Biological Science, Pusan National University, Busan 46241, KoreaDepartment of Integrated Biological Science, Pusan National University, Busan 46241, KoreaBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USAInstitute of Systems Biology, Pusan National University, Busan 46241, KoreaDespite increasing reports on the function of CCCH zinc finger proteins in plant development and stress response, the functions and molecular aspects of many non-tandem CCCH zinc finger (non-TZF) proteins remain uncharacterized. AtC3H59/ZFWD3 is an Arabidopsis non-TZF protein and belongs to the ZFWD subfamily harboring a CCCH zinc finger motif and a WD40 domain. In this study, we characterized the biological and molecular functions of AtC3H59, which is subcellularly localized in the nucleus. The seeds of <em>AtC3H59</em>-overexpressing transgenic plants (OXs) germinated faster than those of wild type (WT), whereas <em>atc3h59</em> mutant seeds germinated slower than WT seeds. <em>AtC3H59</em> OX seedlings were larger and heavier than WT seedlings, whereas <em>atc3h59</em> mutant seedlings were smaller and lighter than WT seedlings. Moreover, <em>AtC3H59</em> OX seedlings had longer primary root length than WT seedlings, whereas <em>atc3h59</em> mutant seedlings had shorter primary root length than WT seedlings, owing to altered cell division activity in the root meristem. During seed development, <em>AtC3H59</em> OXs formed larger and heavier seeds than WT. Using yeast two-hybrid screening, we isolated Desi1, a PPPDE family protein, as an interacting partner of AtC3H59. AtC3H59 and Desi1 interacted via their WD40 domain and C-terminal region, respectively, in the nucleus. Taken together, our results indicate that AtC3H59 has pleiotropic effects on seed germination, seedling development, and seed development, and interacts with Desi1 in the nucleus via its entire WD40 domain. To our knowledge, this is the first report to describe the biological functions of the ZFWD protein and Desi1 in Arabidopsis.https://www.mdpi.com/1422-0067/22/9/4738ArabidopsisAtC3H59CCCH zinc fingernon-TZFPPPDEseed germination
collection DOAJ
language English
format Article
sources DOAJ
author Hye-Yeon Seok
Hyungjoon Bae
Taehyoung Kim
Syed Muhammad Muntazir Mehdi
Linh Vu Nguyen
Sun-Young Lee
Yong-Hwan Moon
spellingShingle Hye-Yeon Seok
Hyungjoon Bae
Taehyoung Kim
Syed Muhammad Muntazir Mehdi
Linh Vu Nguyen
Sun-Young Lee
Yong-Hwan Moon
Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis
International Journal of Molecular Sciences
Arabidopsis
AtC3H59
CCCH zinc finger
non-TZF
PPPDE
seed germination
author_facet Hye-Yeon Seok
Hyungjoon Bae
Taehyoung Kim
Syed Muhammad Muntazir Mehdi
Linh Vu Nguyen
Sun-Young Lee
Yong-Hwan Moon
author_sort Hye-Yeon Seok
title Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis
title_short Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis
title_full Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis
title_fullStr Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis
title_full_unstemmed Non-TZF Protein AtC3H59/ZFWD3 Is Involved in Seed Germination, Seedling Development, and Seed Development, Interacting with PPPDE Family Protein Desi1 in Arabidopsis
title_sort non-tzf protein atc3h59/zfwd3 is involved in seed germination, seedling development, and seed development, interacting with pppde family protein desi1 in arabidopsis
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2021-04-01
description Despite increasing reports on the function of CCCH zinc finger proteins in plant development and stress response, the functions and molecular aspects of many non-tandem CCCH zinc finger (non-TZF) proteins remain uncharacterized. AtC3H59/ZFWD3 is an Arabidopsis non-TZF protein and belongs to the ZFWD subfamily harboring a CCCH zinc finger motif and a WD40 domain. In this study, we characterized the biological and molecular functions of AtC3H59, which is subcellularly localized in the nucleus. The seeds of <em>AtC3H59</em>-overexpressing transgenic plants (OXs) germinated faster than those of wild type (WT), whereas <em>atc3h59</em> mutant seeds germinated slower than WT seeds. <em>AtC3H59</em> OX seedlings were larger and heavier than WT seedlings, whereas <em>atc3h59</em> mutant seedlings were smaller and lighter than WT seedlings. Moreover, <em>AtC3H59</em> OX seedlings had longer primary root length than WT seedlings, whereas <em>atc3h59</em> mutant seedlings had shorter primary root length than WT seedlings, owing to altered cell division activity in the root meristem. During seed development, <em>AtC3H59</em> OXs formed larger and heavier seeds than WT. Using yeast two-hybrid screening, we isolated Desi1, a PPPDE family protein, as an interacting partner of AtC3H59. AtC3H59 and Desi1 interacted via their WD40 domain and C-terminal region, respectively, in the nucleus. Taken together, our results indicate that AtC3H59 has pleiotropic effects on seed germination, seedling development, and seed development, and interacts with Desi1 in the nucleus via its entire WD40 domain. To our knowledge, this is the first report to describe the biological functions of the ZFWD protein and Desi1 in Arabidopsis.
topic Arabidopsis
AtC3H59
CCCH zinc finger
non-TZF
PPPDE
seed germination
url https://www.mdpi.com/1422-0067/22/9/4738
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