Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes
Abstract Objectives Bacillus species, belonging to the family Bacillaceae, are rod-shaped aerobic or facultative anaerobic Gram-positive bacteria that can be isolated from various environmental niches. Bacillus pumilus strains are resistant to unfavorable conditions such as UV, H2O2 and chemical dis...
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doaj-d197845a21e94c4aad8d82cd597739602020-11-25T02:28:16ZengBMCBMC Research Notes1756-05002018-08-011111310.1186/s13104-018-3710-1Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastesElvira E. Ziganshina0Waleed S. Mohammed1Elena I. Shagimardanova2Leyla H. Shigapova3Ayrat M. Ziganshin4Department of Microbiology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal UniversityDepartment of Microbiology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal UniversityLaboratory of Extreme Biology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal UniversityLaboratory of Extreme Biology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal UniversityDepartment of Microbiology, Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal UniversityAbstract Objectives Bacillus species, belonging to the family Bacillaceae, are rod-shaped aerobic or facultative anaerobic Gram-positive bacteria that can be isolated from various environmental niches. Bacillus pumilus strains are resistant to unfavorable conditions such as UV, H2O2 and chemical disinfection. Furthermore, B. pumilus strains synthesize multifarious important enzymes and can be used in the production of some fermented foods, bioremediation of wastewater systems and biodegradation of environmental contaminants. Hence, investigation at the genomic level is required to understand their ecology, genetics and potential applications. Data description In this research, we provide the genomic insights into one Bacillus species (EZ-C07) isolated from digested agricultural waste materials. The draft genome of the strain EZ-C07 consists of 3,724,869 bp with 3890 coding sequences and 41.5% G + C content. Based on 16S rRNA gene sequence analysis followed by in silico DNA–DNA hybridization studies, the strain EZ-C07 was identified as Bacillus pumilus belonging to the family Bacillaceae within the phylum Firmicutes. The whole genome shotgun project of B. pumilus strain EZ-C07 can be accessed at DDBJ/ENA/GenBank under the Accession QLVI00000000.http://link.springer.com/article/10.1186/s13104-018-3710-1Poultry manureBioreactorGenome sequencingFirmicutesBacillus pumilus |
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DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Elvira E. Ziganshina Waleed S. Mohammed Elena I. Shagimardanova Leyla H. Shigapova Ayrat M. Ziganshin |
spellingShingle |
Elvira E. Ziganshina Waleed S. Mohammed Elena I. Shagimardanova Leyla H. Shigapova Ayrat M. Ziganshin Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes BMC Research Notes Poultry manure Bioreactor Genome sequencing Firmicutes Bacillus pumilus |
author_facet |
Elvira E. Ziganshina Waleed S. Mohammed Elena I. Shagimardanova Leyla H. Shigapova Ayrat M. Ziganshin |
author_sort |
Elvira E. Ziganshina |
title |
Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_short |
Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_full |
Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_fullStr |
Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_full_unstemmed |
Draft genome sequence of Bacillus pumilus strain EZ-C07 isolated from digested agricultural wastes |
title_sort |
draft genome sequence of bacillus pumilus strain ez-c07 isolated from digested agricultural wastes |
publisher |
BMC |
series |
BMC Research Notes |
issn |
1756-0500 |
publishDate |
2018-08-01 |
description |
Abstract Objectives Bacillus species, belonging to the family Bacillaceae, are rod-shaped aerobic or facultative anaerobic Gram-positive bacteria that can be isolated from various environmental niches. Bacillus pumilus strains are resistant to unfavorable conditions such as UV, H2O2 and chemical disinfection. Furthermore, B. pumilus strains synthesize multifarious important enzymes and can be used in the production of some fermented foods, bioremediation of wastewater systems and biodegradation of environmental contaminants. Hence, investigation at the genomic level is required to understand their ecology, genetics and potential applications. Data description In this research, we provide the genomic insights into one Bacillus species (EZ-C07) isolated from digested agricultural waste materials. The draft genome of the strain EZ-C07 consists of 3,724,869 bp with 3890 coding sequences and 41.5% G + C content. Based on 16S rRNA gene sequence analysis followed by in silico DNA–DNA hybridization studies, the strain EZ-C07 was identified as Bacillus pumilus belonging to the family Bacillaceae within the phylum Firmicutes. The whole genome shotgun project of B. pumilus strain EZ-C07 can be accessed at DDBJ/ENA/GenBank under the Accession QLVI00000000. |
topic |
Poultry manure Bioreactor Genome sequencing Firmicutes Bacillus pumilus |
url |
http://link.springer.com/article/10.1186/s13104-018-3710-1 |
work_keys_str_mv |
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