The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities

Numerous enzymes that digest carbohydrates, such as cellulases and chitinases, are present in various organisms (e.g., termites, nematodes, and so on). Recently, the presence of cellulases and chitinases has been reported in marine organisms such as urchin and bivalves, and their several roles in ma...

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Main Authors: Yuki Yoshioka, Toshiaki Tanabe, Akira Iguchi
Format: Article
Language:English
Published: PeerJ Inc. 2017-11-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/4087.pdf
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spelling doaj-d0a99d03956746e4ac7682e6585ce34e2020-11-24T20:46:40ZengPeerJ Inc.PeerJ2167-83592017-11-015e408710.7717/peerj.4087The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activitiesYuki Yoshioka0Toshiaki Tanabe1Akira IguchiDepartment of Bioresources Engineering, National Institute of Technology, Okinawa College, Nago-City, Okinawa, JapanDepartment of Bioresources Engineering, National Institute of Technology, Okinawa College, Nago-City, Okinawa, JapanNumerous enzymes that digest carbohydrates, such as cellulases and chitinases, are present in various organisms (e.g., termites, nematodes, and so on). Recently, the presence of cellulases and chitinases has been reported in marine organisms such as urchin and bivalves, and their several roles in marine ecosystems have been proposed. In this study, we reported the presence of genes predicted to encode proteins similar to cellulases and chitinases in the genome of the coral Acropora digitifera, their gene expression patterns at various life stages, and cellulose- and chitin-degrading enzyme activities in several coral species (A. digitifera, Galaxea fascicularis, Goniastrea aspera, Montipora digitata, Pavona divaricata, Pocillopora damicornis, and Porites australiensis). Our gene expression analysis demonstrated the expressions of these cellulase- and chitinase-like genes during various life stages, including unfertilized eggs, fertilized eggs, zygotes, planula larvae, primary polyps and adults of A. digitifera. Agar plate assays confirmed cellulase and chitinase activities in the tissues extracted from adult branches of several coral species. These results suggested that corals are able to utilize cellulases and chitinases in their life histories.https://peerj.com/articles/4087.pdfCellulaseCoral enzymesEnzyme activityGene expressionChitinase
collection DOAJ
language English
format Article
sources DOAJ
author Yuki Yoshioka
Toshiaki Tanabe
Akira Iguchi
spellingShingle Yuki Yoshioka
Toshiaki Tanabe
Akira Iguchi
The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
PeerJ
Cellulase
Coral enzymes
Enzyme activity
Gene expression
Chitinase
author_facet Yuki Yoshioka
Toshiaki Tanabe
Akira Iguchi
author_sort Yuki Yoshioka
title The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
title_short The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
title_full The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
title_fullStr The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
title_full_unstemmed The presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
title_sort presence of genes encoding enzymes that digest carbohydrates in coral genomes and analysis of their activities
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2017-11-01
description Numerous enzymes that digest carbohydrates, such as cellulases and chitinases, are present in various organisms (e.g., termites, nematodes, and so on). Recently, the presence of cellulases and chitinases has been reported in marine organisms such as urchin and bivalves, and their several roles in marine ecosystems have been proposed. In this study, we reported the presence of genes predicted to encode proteins similar to cellulases and chitinases in the genome of the coral Acropora digitifera, their gene expression patterns at various life stages, and cellulose- and chitin-degrading enzyme activities in several coral species (A. digitifera, Galaxea fascicularis, Goniastrea aspera, Montipora digitata, Pavona divaricata, Pocillopora damicornis, and Porites australiensis). Our gene expression analysis demonstrated the expressions of these cellulase- and chitinase-like genes during various life stages, including unfertilized eggs, fertilized eggs, zygotes, planula larvae, primary polyps and adults of A. digitifera. Agar plate assays confirmed cellulase and chitinase activities in the tissues extracted from adult branches of several coral species. These results suggested that corals are able to utilize cellulases and chitinases in their life histories.
topic Cellulase
Coral enzymes
Enzyme activity
Gene expression
Chitinase
url https://peerj.com/articles/4087.pdf
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