Screening synteny blocks in pairwise genome comparisons through integer programming
<p>Abstract</p> <p>Background</p> <p>It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly problematic among lineages that have r...
Main Authors: | Paterson Andrew H, Schnable James C, Pedersen Brent, Lyons Eric, Tang Haibao, Freeling Michael |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2011-04-01
|
Series: | BMC Bioinformatics |
Online Access: | http://www.biomedcentral.com/1471-2105/12/102 |
Similar Items
-
Screening synteny blocks in pairwise genome comparisons through integer programming
by: Tang, Haibao, et al.
Published: (2011) -
Gene order in rosid phylogeny, inferred from pairwise syntenies among extant genomes
by: Zheng Chunfang, et al.
Published: (2012-06-01) -
SyntenyTracker: a tool for defining homologous synteny blocks using radiation hybrid maps and whole-genome sequence
by: Lewin Harris A, et al.
Published: (2009-07-01) -
mySyntenyPortal: an application package to construct websites for synteny block analysis
by: Jongin Lee, et al.
Published: (2018-06-01) -
A Plasmodium whole-genome synteny map: indels and synteny breakpoints as foci for species-specific genes.
by: Taco W A Kooij, et al.
Published: (2005-12-01)