Marine Microbial Metagenomics: From Individual to the Environment

Microbes are the most abundant biological entities on earth, therefore, studying them is important for understanding their roles in global ecology. The science of metagenomics is a relatively young field of research that has enjoyed significant effort since its inception in 1998. Studies using next-...

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Main Authors: Ching-Hung Tseng, Sen-Lin Tang
Format: Article
Language:English
Published: MDPI AG 2014-05-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/15/5/8878
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spelling doaj-d00d3ea71e9d49daabbda76becf7d79f2020-11-24T21:20:06ZengMDPI AGInternational Journal of Molecular Sciences1422-00672014-05-011558878889210.3390/ijms15058878ijms15058878Marine Microbial Metagenomics: From Individual to the EnvironmentChing-Hung Tseng0Sen-Lin Tang1Bioinformatics Program, Taiwan International Graduate Program, Institute of Information Science, Academia Sinica, Taipei 11529, TaiwanBioinformatics Program, Taiwan International Graduate Program, Institute of Information Science, Academia Sinica, Taipei 11529, TaiwanMicrobes are the most abundant biological entities on earth, therefore, studying them is important for understanding their roles in global ecology. The science of metagenomics is a relatively young field of research that has enjoyed significant effort since its inception in 1998. Studies using next-generation sequencing techniques on single genomes and collections of genomes have not only led to novel insights into microbial genomics, but also revealed a close association between environmental niches and genome evolution. Herein, we review studies investigating microbial genomics (largely in the marine ecosystem) at the individual and community levels to summarize our current understanding of microbial ecology in the environment.http://www.mdpi.com/1422-0067/15/5/8878bacteriaenvironmental genomicsmetagenomicsmicrobial ecology
collection DOAJ
language English
format Article
sources DOAJ
author Ching-Hung Tseng
Sen-Lin Tang
spellingShingle Ching-Hung Tseng
Sen-Lin Tang
Marine Microbial Metagenomics: From Individual to the Environment
International Journal of Molecular Sciences
bacteria
environmental genomics
metagenomics
microbial ecology
author_facet Ching-Hung Tseng
Sen-Lin Tang
author_sort Ching-Hung Tseng
title Marine Microbial Metagenomics: From Individual to the Environment
title_short Marine Microbial Metagenomics: From Individual to the Environment
title_full Marine Microbial Metagenomics: From Individual to the Environment
title_fullStr Marine Microbial Metagenomics: From Individual to the Environment
title_full_unstemmed Marine Microbial Metagenomics: From Individual to the Environment
title_sort marine microbial metagenomics: from individual to the environment
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2014-05-01
description Microbes are the most abundant biological entities on earth, therefore, studying them is important for understanding their roles in global ecology. The science of metagenomics is a relatively young field of research that has enjoyed significant effort since its inception in 1998. Studies using next-generation sequencing techniques on single genomes and collections of genomes have not only led to novel insights into microbial genomics, but also revealed a close association between environmental niches and genome evolution. Herein, we review studies investigating microbial genomics (largely in the marine ecosystem) at the individual and community levels to summarize our current understanding of microbial ecology in the environment.
topic bacteria
environmental genomics
metagenomics
microbial ecology
url http://www.mdpi.com/1422-0067/15/5/8878
work_keys_str_mv AT chinghungtseng marinemicrobialmetagenomicsfromindividualtotheenvironment
AT senlintang marinemicrobialmetagenomicsfromindividualtotheenvironment
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