Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies

Many<b> </b>proteins contain intrinsically disordered regions (IDRs) which carry out important functions without relying on a single well-defined conformation. IDRs are increasingly recognized as critical elements of regulatory networks and have been also associated with cancer. However,...

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Main Authors: Bálint Mészáros, Borbála Hajdu-Soltész, András Zeke, Zsuzsanna Dosztányi
Format: Article
Language:English
Published: MDPI AG 2021-03-01
Series:Biomolecules
Subjects:
Online Access:https://www.mdpi.com/2218-273X/11/3/381
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spelling doaj-cf6063ae62914c77a4380e75ba2804772021-03-05T00:06:42ZengMDPI AGBiomolecules2218-273X2021-03-011138138110.3390/biom11030381Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic StrategiesBálint Mészáros0Borbála Hajdu-Soltész1András Zeke2Zsuzsanna Dosztányi3Department of Biochemistry, ELTE Eötvös Loránd University, H-1117 Budapest, HungaryDepartment of Biochemistry, ELTE Eötvös Loránd University, H-1117 Budapest, HungaryInstitute of Enzymology, RCNS, PO Box 7, H-1518 Budapest, HungaryDepartment of Biochemistry, ELTE Eötvös Loránd University, H-1117 Budapest, HungaryMany<b> </b>proteins contain intrinsically disordered regions (IDRs) which carry out important functions without relying on a single well-defined conformation. IDRs are increasingly recognized as critical elements of regulatory networks and have been also associated with cancer. However, it is unknown whether mutations targeting IDRs represent a distinct class of driver events associated with specific molecular and system-level properties, cancer types and treatment options. Here, we used an integrative computational approach to explore the direct role of intrinsically disordered protein regions driving cancer. We showed that around 20% of cancer drivers are primarily targeted through a disordered region. These IDRs can function in multiple ways which are distinct from the functional mechanisms of ordered drivers. Disordered drivers play a central role in context-dependent interaction networks and are enriched in specific biological processes such as transcription, gene expression regulation and protein degradation. Furthermore, their modulation represents an alternative mechanism for the emergence of all known cancer hallmarks. Importantly, in certain cancer patients, mutations of disordered drivers represent key driving events. However, treatment options for such patients are currently severely limited. The presented study highlights a largely overlooked class of cancer drivers associated with specific cancer types that need novel therapeutic options.https://www.mdpi.com/2218-273X/11/3/381intrinsically disordered regionsprotein modulesshort linear motifsmolecular switchescancer genomicsdriver gene identification
collection DOAJ
language English
format Article
sources DOAJ
author Bálint Mészáros
Borbála Hajdu-Soltész
András Zeke
Zsuzsanna Dosztányi
spellingShingle Bálint Mészáros
Borbála Hajdu-Soltész
András Zeke
Zsuzsanna Dosztányi
Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies
Biomolecules
intrinsically disordered regions
protein modules
short linear motifs
molecular switches
cancer genomics
driver gene identification
author_facet Bálint Mészáros
Borbála Hajdu-Soltész
András Zeke
Zsuzsanna Dosztányi
author_sort Bálint Mészáros
title Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies
title_short Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies
title_full Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies
title_fullStr Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies
title_full_unstemmed Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies
title_sort mutations of intrinsically disordered protein regions can drive cancer but lack therapeutic strategies
publisher MDPI AG
series Biomolecules
issn 2218-273X
publishDate 2021-03-01
description Many<b> </b>proteins contain intrinsically disordered regions (IDRs) which carry out important functions without relying on a single well-defined conformation. IDRs are increasingly recognized as critical elements of regulatory networks and have been also associated with cancer. However, it is unknown whether mutations targeting IDRs represent a distinct class of driver events associated with specific molecular and system-level properties, cancer types and treatment options. Here, we used an integrative computational approach to explore the direct role of intrinsically disordered protein regions driving cancer. We showed that around 20% of cancer drivers are primarily targeted through a disordered region. These IDRs can function in multiple ways which are distinct from the functional mechanisms of ordered drivers. Disordered drivers play a central role in context-dependent interaction networks and are enriched in specific biological processes such as transcription, gene expression regulation and protein degradation. Furthermore, their modulation represents an alternative mechanism for the emergence of all known cancer hallmarks. Importantly, in certain cancer patients, mutations of disordered drivers represent key driving events. However, treatment options for such patients are currently severely limited. The presented study highlights a largely overlooked class of cancer drivers associated with specific cancer types that need novel therapeutic options.
topic intrinsically disordered regions
protein modules
short linear motifs
molecular switches
cancer genomics
driver gene identification
url https://www.mdpi.com/2218-273X/11/3/381
work_keys_str_mv AT balintmeszaros mutationsofintrinsicallydisorderedproteinregionscandrivecancerbutlacktherapeuticstrategies
AT borbalahajdusoltesz mutationsofintrinsicallydisorderedproteinregionscandrivecancerbutlacktherapeuticstrategies
AT andraszeke mutationsofintrinsicallydisorderedproteinregionscandrivecancerbutlacktherapeuticstrategies
AT zsuzsannadosztanyi mutationsofintrinsicallydisorderedproteinregionscandrivecancerbutlacktherapeuticstrategies
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