Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map

Point detection (e.g., the centroid of the body) of species has been conducted in numerous studies. However, line detection (i.e., the line body shape) of elongated species has rarely been investigated under stressful conditions. We analyzed the line movements of an Oligochaeta <i>Lumbriculus...

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Main Authors: Chang Woo Ji, Young-Seuk Park, Yongde Cui, Hongzhu Wang, Ihn-Sil Kwak, Tae-Soo Chon
Format: Article
Language:English
Published: MDPI AG 2020-04-01
Series:International Journal of Environmental Research and Public Health
Subjects:
Online Access:https://www.mdpi.com/1660-4601/17/8/2627
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spelling doaj-cf1ada32cf244babb49cc79c493ec2e42020-11-25T02:44:06ZengMDPI AGInternational Journal of Environmental Research and Public Health1661-78271660-46012020-04-01172627262710.3390/ijerph17082627Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing MapChang Woo Ji0Young-Seuk Park1Yongde Cui2Hongzhu Wang3Ihn-Sil Kwak4Tae-Soo Chon5Fisheries Science Institute, Chonnam National University, Yeosu 59626, KoreaDepartment of Biology and Department of Life and Nanopharmaceutical Sciences, Kyung Hee University, Seoul 02447, KoreaInstitute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, ChinaInstitute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, ChinaFisheries Science Institute, Chonnam National University, Yeosu 59626, KoreaEcology and Future Research Association (EnFRA), Dusil-ro 45 beon-gil 21, Geumjeong-gu, Busan 46228, KoreaPoint detection (e.g., the centroid of the body) of species has been conducted in numerous studies. However, line detection (i.e., the line body shape) of elongated species has rarely been investigated under stressful conditions. We analyzed the line movements of an Oligochaeta <i>Lumbriculus variegatus</i> in response to treatments with a toxic chemical, copper sulfate, at low concentrations (0.01 mg/L and 0.1 mg/L). The automatic line-tracking system was devised to identify the movement of body segments (body length) and the movements of segments (i.e., the speed and angles between segments) were recorded before and after treatment. Total body length was shortened from 31.22 (±5.18) mm to 20.91 (±4.65) mm after the 0.1 mg/L treatment. The Shannon entropy index decreased from 0.44 (±0.1) to 0.28 (±0.08) after treatment. On the other hand, the body and movement segments did not significantly change after the 0.01 mg/L treatment. Sequential movements of test organisms were further analyzed with a recurrent self-organizing map (RSOM) to determine the pattern of time-series line movements. The RSOM made it feasible to classify sequential behaviors of indicator organisms and identify various continuous body movements under stressful conditions.https://www.mdpi.com/1660-4601/17/8/2627<i>Lumbriculus variegatus</i>line-trackingresponse behaviorcomputational methodcopper sulfaterisk assessment
collection DOAJ
language English
format Article
sources DOAJ
author Chang Woo Ji
Young-Seuk Park
Yongde Cui
Hongzhu Wang
Ihn-Sil Kwak
Tae-Soo Chon
spellingShingle Chang Woo Ji
Young-Seuk Park
Yongde Cui
Hongzhu Wang
Ihn-Sil Kwak
Tae-Soo Chon
Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map
International Journal of Environmental Research and Public Health
<i>Lumbriculus variegatus</i>
line-tracking
response behavior
computational method
copper sulfate
risk assessment
author_facet Chang Woo Ji
Young-Seuk Park
Yongde Cui
Hongzhu Wang
Ihn-Sil Kwak
Tae-Soo Chon
author_sort Chang Woo Ji
title Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map
title_short Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map
title_full Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map
title_fullStr Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map
title_full_unstemmed Analyzing the Response Behavior of <i>Lumbriculus variegatus</i> (Oligochaeta: Lumbriculidae) to Different Concentrations of Copper Sulfate Based on Line Body Shape Detection and a Recurrent Self-Organizing Map
title_sort analyzing the response behavior of <i>lumbriculus variegatus</i> (oligochaeta: lumbriculidae) to different concentrations of copper sulfate based on line body shape detection and a recurrent self-organizing map
publisher MDPI AG
series International Journal of Environmental Research and Public Health
issn 1661-7827
1660-4601
publishDate 2020-04-01
description Point detection (e.g., the centroid of the body) of species has been conducted in numerous studies. However, line detection (i.e., the line body shape) of elongated species has rarely been investigated under stressful conditions. We analyzed the line movements of an Oligochaeta <i>Lumbriculus variegatus</i> in response to treatments with a toxic chemical, copper sulfate, at low concentrations (0.01 mg/L and 0.1 mg/L). The automatic line-tracking system was devised to identify the movement of body segments (body length) and the movements of segments (i.e., the speed and angles between segments) were recorded before and after treatment. Total body length was shortened from 31.22 (±5.18) mm to 20.91 (±4.65) mm after the 0.1 mg/L treatment. The Shannon entropy index decreased from 0.44 (±0.1) to 0.28 (±0.08) after treatment. On the other hand, the body and movement segments did not significantly change after the 0.01 mg/L treatment. Sequential movements of test organisms were further analyzed with a recurrent self-organizing map (RSOM) to determine the pattern of time-series line movements. The RSOM made it feasible to classify sequential behaviors of indicator organisms and identify various continuous body movements under stressful conditions.
topic <i>Lumbriculus variegatus</i>
line-tracking
response behavior
computational method
copper sulfate
risk assessment
url https://www.mdpi.com/1660-4601/17/8/2627
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