Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018

Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018

We retrieved Nipah virus (NiV) sequences from 4 human and 3 fruit bat (Pteropus medius) samples from a 2018 outbreak in Kerala, India. Phylogenetic analysis demonstrated that NiV from humans was 96.15% similar to a Bangladesh strain but 99.7%–100% similar to virus from Pteropus spp. bats, indicating...

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Main Authors: Pragya D. Yadav, Anita M. Shete, G. Arun Kumar, Prasad Sarkale, Rima R. Sahay, Chandni Radhakrishnan, Rajen Lakra, Prachi Pardeshi, Nivedita Gupta, Raman R. Gangakhedkar, V.R. Rajendran, Rajeev Sadanandan, Devendra T. Mourya
Format: Article
Language:English
Published: Centers for Disease Control and Prevention 2019-05-01
Series:Emerging Infectious Diseases
Subjects:
Human
Kerala
next-generation sequencing
Nipah virus
Pteropus medius
qRT-PCR
Online Access:https://wwwnc.cdc.gov/eid/article/25/5/18-1076_article
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spelling doaj-cd73098449034a32932c2e331bf7b4642020-11-25T01:35:12ZengCenters for Disease Control and PreventionEmerging Infectious Diseases1080-60401080-60592019-05-012551003100610.3201/eid2505.181076Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018Pragya D. YadavAnita M. SheteG. Arun KumarPrasad SarkaleRima R. SahayChandni RadhakrishnanRajen LakraPrachi PardeshiNivedita GuptaRaman R. GangakhedkarV.R. RajendranRajeev SadanandanDevendra T. MouryaWe retrieved Nipah virus (NiV) sequences from 4 human and 3 fruit bat (Pteropus medius) samples from a 2018 outbreak in Kerala, India. Phylogenetic analysis demonstrated that NiV from humans was 96.15% similar to a Bangladesh strain but 99.7%–100% similar to virus from Pteropus spp. bats, indicating bats were the source of the outbreak.https://wwwnc.cdc.gov/eid/article/25/5/18-1076_articleHumanKeralanext-generation sequencingNipah virusPteropus mediusqRT-PCR
collection DOAJ
language English
format Article
sources DOAJ
author Pragya D. Yadav
Anita M. Shete
G. Arun Kumar
Prasad Sarkale
Rima R. Sahay
Chandni Radhakrishnan
Rajen Lakra
Prachi Pardeshi
Nivedita Gupta
Raman R. Gangakhedkar
V.R. Rajendran
Rajeev Sadanandan
Devendra T. Mourya
spellingShingle Pragya D. Yadav
Anita M. Shete
G. Arun Kumar
Prasad Sarkale
Rima R. Sahay
Chandni Radhakrishnan
Rajen Lakra
Prachi Pardeshi
Nivedita Gupta
Raman R. Gangakhedkar
V.R. Rajendran
Rajeev Sadanandan
Devendra T. Mourya
Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018
Emerging Infectious Diseases
Human
Kerala
next-generation sequencing
Nipah virus
Pteropus medius
qRT-PCR
author_facet Pragya D. Yadav
Anita M. Shete
G. Arun Kumar
Prasad Sarkale
Rima R. Sahay
Chandni Radhakrishnan
Rajen Lakra
Prachi Pardeshi
Nivedita Gupta
Raman R. Gangakhedkar
V.R. Rajendran
Rajeev Sadanandan
Devendra T. Mourya
author_sort Pragya D. Yadav
title Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018
title_short Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018
title_full Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018
title_fullStr Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018
title_full_unstemmed Nipah Virus Sequences from Humans and Bats during Nipah Outbreak, Kerala, India, 2018
title_sort nipah virus sequences from humans and bats during nipah outbreak, kerala, india, 2018
publisher Centers for Disease Control and Prevention
series Emerging Infectious Diseases
issn 1080-6040
1080-6059
publishDate 2019-05-01
description We retrieved Nipah virus (NiV) sequences from 4 human and 3 fruit bat (Pteropus medius) samples from a 2018 outbreak in Kerala, India. Phylogenetic analysis demonstrated that NiV from humans was 96.15% similar to a Bangladesh strain but 99.7%–100% similar to virus from Pteropus spp. bats, indicating bats were the source of the outbreak.
topic Human
Kerala
next-generation sequencing
Nipah virus
Pteropus medius
qRT-PCR
url https://wwwnc.cdc.gov/eid/article/25/5/18-1076_article
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