A scale-free analysis of the HIV-1 genome demonstrates multiple conserved regions of structural and functional importance.
HIV-1 replicates via a low-fidelity polymerase with a high mutation rate; strong conservation of individual nucleotides is highly indicative of the presence of critical structural or functional properties. Identifying such conservation can reveal novel insights into viral behaviour. We analysed 3651...
Main Authors: | Jordan P Skittrall, Carin K Ingemarsdotter, Julia R Gog, Andrew M L Lever |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2019-09-01
|
Series: | PLoS Computational Biology |
Online Access: | https://doi.org/10.1371/journal.pcbi.1007345 |
Similar Items
-
A new method for detecting signal regions in ordered sequences of real numbers, and application to viral genomic data.
by: Julia R Gog, et al.
Published: (2018-01-01) -
An RNA-binding compound that stabilizes the HIV-1 gRNA packaging signal structure and specifically blocks HIV-1 RNA encapsidation
by: Carin K. Ingemarsdotter, et al.
Published: (2018-03-01) -
Expression of Herpes Simplex Virus Thymidine Kinase/Ganciclovir by RNA Trans-Splicing Induces Selective Killing of HIV-Producing Cells
by: Carin K. Ingemarsdotter, et al.
Published: (2017-06-01) -
The dynamics of multiple strains of an infectious disease
by: Gog, Julia Rose
Published: (2003) -
Coordination of Genomic RNA Packaging with Viral Assembly in HIV-1
by: Chris Hellmund, et al.
Published: (2016-07-01)