Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy

During the development of antimicrobial peptides (AMP) as potential therapeutics, antimicrobial susceptibility testing (AST) stands as an essential part of the process in identification and optimisation of candidate AMP. Standard methods for AST, developed almost 60 years ago for testing conventiona...

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Main Authors: Derry K. Mercer, Marcelo D. T. Torres, Searle S. Duay, Emma Lovie, Laura Simpson, Maren von Köckritz-Blickwede, Cesar de la Fuente-Nunez, Deborah A. O'Neil, Alfredo M. Angeles-Boza
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-07-01
Series:Frontiers in Cellular and Infection Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fcimb.2020.00326/full
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spelling doaj-cb7083b22aab46b1a35f2adf0a49fc8a2020-11-25T03:49:23ZengFrontiers Media S.A.Frontiers in Cellular and Infection Microbiology2235-29882020-07-011010.3389/fcimb.2020.00326540826Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict EfficacyDerry K. Mercer0Marcelo D. T. Torres1Searle S. Duay2Emma Lovie3Laura Simpson4Maren von Köckritz-Blickwede5Cesar de la Fuente-Nunez6Deborah A. O'Neil7Alfredo M. Angeles-Boza8NovaBiotics Ltd, Aberdeen, United KingdomMachine Biology Group, Departments of Psychiatry and Microbiology, Institute for Biomedical Informatics, Institute for Translational Medicine and Therapeutics, Perelman School of Medicine, Penn Institute for Computational Science, and Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, United StatesDepartment of Chemistry, Institute of Materials Science, University of Connecticut, Storrs, CT, United StatesNovaBiotics Ltd, Aberdeen, United KingdomNovaBiotics Ltd, Aberdeen, United KingdomInstitute for Biochemistry, University of Veterinary Medicine, Hanover, GermanyMachine Biology Group, Departments of Psychiatry and Microbiology, Institute for Biomedical Informatics, Institute for Translational Medicine and Therapeutics, Perelman School of Medicine, Penn Institute for Computational Science, and Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, United StatesNovaBiotics Ltd, Aberdeen, United KingdomDepartment of Chemistry, Institute of Materials Science, University of Connecticut, Storrs, CT, United StatesDuring the development of antimicrobial peptides (AMP) as potential therapeutics, antimicrobial susceptibility testing (AST) stands as an essential part of the process in identification and optimisation of candidate AMP. Standard methods for AST, developed almost 60 years ago for testing conventional antibiotics, are not necessarily fit for purpose when it comes to determining the susceptibility of microorganisms to AMP. Without careful consideration of the parameters comprising AST there is a risk of failing to identify novel antimicrobials at a time when antimicrobial resistance (AMR) is leading the planet toward a post-antibiotic era. More physiologically/clinically relevant AST will allow better determination of the preclinical activity of drug candidates and allow the identification of lead compounds. An important consideration is the efficacy of AMP in biological matrices replicating sites of infection, e.g., blood/plasma/serum, lung bronchiolar lavage fluid/sputum, urine, biofilms, etc., as this will likely be more predictive of clinical efficacy. Additionally, specific AST for different target microorganisms may help to better predict efficacy of AMP in specific infections. In this manuscript, we describe what we believe are the key considerations for AST of AMP and hope that this information can better guide the preclinical development of AMP toward becoming a new generation of urgently needed antimicrobials.https://www.frontiersin.org/article/10.3389/fcimb.2020.00326/fullantimicrobial peptide (AMP)antimicrobial susceptibility testingantibioticantifungalhost defence peptide (HDP)
collection DOAJ
language English
format Article
sources DOAJ
author Derry K. Mercer
Marcelo D. T. Torres
Searle S. Duay
Emma Lovie
Laura Simpson
Maren von Köckritz-Blickwede
Cesar de la Fuente-Nunez
Deborah A. O'Neil
Alfredo M. Angeles-Boza
spellingShingle Derry K. Mercer
Marcelo D. T. Torres
Searle S. Duay
Emma Lovie
Laura Simpson
Maren von Köckritz-Blickwede
Cesar de la Fuente-Nunez
Deborah A. O'Neil
Alfredo M. Angeles-Boza
Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
Frontiers in Cellular and Infection Microbiology
antimicrobial peptide (AMP)
antimicrobial susceptibility testing
antibiotic
antifungal
host defence peptide (HDP)
author_facet Derry K. Mercer
Marcelo D. T. Torres
Searle S. Duay
Emma Lovie
Laura Simpson
Maren von Köckritz-Blickwede
Cesar de la Fuente-Nunez
Deborah A. O'Neil
Alfredo M. Angeles-Boza
author_sort Derry K. Mercer
title Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
title_short Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
title_full Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
title_fullStr Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
title_full_unstemmed Antimicrobial Susceptibility Testing of Antimicrobial Peptides to Better Predict Efficacy
title_sort antimicrobial susceptibility testing of antimicrobial peptides to better predict efficacy
publisher Frontiers Media S.A.
series Frontiers in Cellular and Infection Microbiology
issn 2235-2988
publishDate 2020-07-01
description During the development of antimicrobial peptides (AMP) as potential therapeutics, antimicrobial susceptibility testing (AST) stands as an essential part of the process in identification and optimisation of candidate AMP. Standard methods for AST, developed almost 60 years ago for testing conventional antibiotics, are not necessarily fit for purpose when it comes to determining the susceptibility of microorganisms to AMP. Without careful consideration of the parameters comprising AST there is a risk of failing to identify novel antimicrobials at a time when antimicrobial resistance (AMR) is leading the planet toward a post-antibiotic era. More physiologically/clinically relevant AST will allow better determination of the preclinical activity of drug candidates and allow the identification of lead compounds. An important consideration is the efficacy of AMP in biological matrices replicating sites of infection, e.g., blood/plasma/serum, lung bronchiolar lavage fluid/sputum, urine, biofilms, etc., as this will likely be more predictive of clinical efficacy. Additionally, specific AST for different target microorganisms may help to better predict efficacy of AMP in specific infections. In this manuscript, we describe what we believe are the key considerations for AST of AMP and hope that this information can better guide the preclinical development of AMP toward becoming a new generation of urgently needed antimicrobials.
topic antimicrobial peptide (AMP)
antimicrobial susceptibility testing
antibiotic
antifungal
host defence peptide (HDP)
url https://www.frontiersin.org/article/10.3389/fcimb.2020.00326/full
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