The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration
The transcription repressor FOXP2 is a crucial player in nervous system evolution and development of humans and songbirds. In order to provide an additional insight into its functional role we compared target gene expression levels between human neuroblastoma cells (SH-SY5Y) stably overexpressing FO...
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doaj-cae7d9bd1909477e9ff58907505c063c2020-11-24T23:02:50ZengFrontiers Media S.A.Frontiers in Cellular Neuroscience1662-51022017-07-011110.3389/fncel.2017.00212267525The FOXP2-Driven Network in Developmental Disorders and NeurodegenerationFranz Oswald0Patricia Klöble1André Ruland2David Rosenkranz3Bastian Hinz4Bastian Hinz5Falk Butter6Sanja Ramljak7Ulrich Zechner8Ulrich Zechner9Holger Herlyn10Center for Internal Medicine, Department of Internal Medicine I, University Medical Center UlmUlm, GermanyCenter for Internal Medicine, Department of Internal Medicine I, University Medical Center UlmUlm, GermanyCenter for Internal Medicine, Department of Internal Medicine I, University Medical Center UlmUlm, GermanyInstitut für Organismische und Molekulare Evolutionsbiologie, Johannes Gutenberg-University MainzMainz, GermanyInstitut für Organismische und Molekulare Evolutionsbiologie, Johannes Gutenberg-University MainzMainz, GermanyInstitute of Human Genetics, University Medical Center MainzMainz, GermanyInstitute of Molecular BiologyMainz, GermanySciema UGMainz, GermanyInstitute of Human Genetics, University Medical Center MainzMainz, GermanyDr. Senckenbergisches Zentrum für HumangenetikFrankfurt, GermanyInstitut für Organismische und Molekulare Evolutionsbiologie, Johannes Gutenberg-University MainzMainz, GermanyThe transcription repressor FOXP2 is a crucial player in nervous system evolution and development of humans and songbirds. In order to provide an additional insight into its functional role we compared target gene expression levels between human neuroblastoma cells (SH-SY5Y) stably overexpressing FOXP2 cDNA of either humans or the common chimpanzee, Rhesus monkey, and marmoset, respectively. RNA-seq led to identification of 27 genes with differential regulation under the control of human FOXP2, which were previously reported to have FOXP2-driven and/or songbird song-related expression regulation. RT-qPCR and Western blotting indicated differential regulation of additional 13 new target genes in response to overexpression of human FOXP2. These genes may be directly regulated by FOXP2 considering numerous matches of established FOXP2-binding motifs as well as publicly available FOXP2-ChIP-seq reads within their putative promoters. Ontology analysis of the new and reproduced targets, along with their interactors in a network, revealed an enrichment of terms relating to cellular signaling and communication, metabolism and catabolism, cellular migration and differentiation, and expression regulation. Notably, terms including the words “neuron” or “axonogenesis” were also enriched. Complementary literature screening uncovered many connections to human developmental (autism spectrum disease, schizophrenia, Down syndrome, agenesis of corpus callosum, trismus-pseudocamptodactyly, ankyloglossia, facial dysmorphology) and neurodegenerative diseases and disorders (Alzheimer’s, Parkinson’s, and Huntington’s diseases, Lewy body dementia, amyotrophic lateral sclerosis). Links to deafness and dyslexia were detected, too. Such relations existed for single proteins (e.g., DCDC2, NURR1, PHOX2B, MYH8, and MYH13) and groups of proteins which conjointly function in mRNA processing, ribosomal recruitment, cell–cell adhesion (e.g., CDH4), cytoskeleton organization, neuro-inflammation, and processing of amyloid precursor protein. Conspicuously, many links pointed to an involvement of the FOXP2-driven network in JAK/STAT signaling and the regulation of the ezrin–radixin–moesin complex. Altogether, the applied phylogenetic perspective substantiated FOXP2’s importance for nervous system development, maintenance, and functioning. However, the study also disclosed new regulatory pathways that might prove to be useful for understanding the molecular background of the aforementioned developmental disorders and neurodegenerative diseases.http://journal.frontiersin.org/article/10.3389/fncel.2017.00212/fulllanguagespeechbrainschizophreniaParkinson’s diseaseAlzheimer’s disease |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Franz Oswald Patricia Klöble André Ruland David Rosenkranz Bastian Hinz Bastian Hinz Falk Butter Sanja Ramljak Ulrich Zechner Ulrich Zechner Holger Herlyn |
spellingShingle |
Franz Oswald Patricia Klöble André Ruland David Rosenkranz Bastian Hinz Bastian Hinz Falk Butter Sanja Ramljak Ulrich Zechner Ulrich Zechner Holger Herlyn The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration Frontiers in Cellular Neuroscience language speech brain schizophrenia Parkinson’s disease Alzheimer’s disease |
author_facet |
Franz Oswald Patricia Klöble André Ruland David Rosenkranz Bastian Hinz Bastian Hinz Falk Butter Sanja Ramljak Ulrich Zechner Ulrich Zechner Holger Herlyn |
author_sort |
Franz Oswald |
title |
The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration |
title_short |
The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration |
title_full |
The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration |
title_fullStr |
The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration |
title_full_unstemmed |
The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration |
title_sort |
foxp2-driven network in developmental disorders and neurodegeneration |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Cellular Neuroscience |
issn |
1662-5102 |
publishDate |
2017-07-01 |
description |
The transcription repressor FOXP2 is a crucial player in nervous system evolution and development of humans and songbirds. In order to provide an additional insight into its functional role we compared target gene expression levels between human neuroblastoma cells (SH-SY5Y) stably overexpressing FOXP2 cDNA of either humans or the common chimpanzee, Rhesus monkey, and marmoset, respectively. RNA-seq led to identification of 27 genes with differential regulation under the control of human FOXP2, which were previously reported to have FOXP2-driven and/or songbird song-related expression regulation. RT-qPCR and Western blotting indicated differential regulation of additional 13 new target genes in response to overexpression of human FOXP2. These genes may be directly regulated by FOXP2 considering numerous matches of established FOXP2-binding motifs as well as publicly available FOXP2-ChIP-seq reads within their putative promoters. Ontology analysis of the new and reproduced targets, along with their interactors in a network, revealed an enrichment of terms relating to cellular signaling and communication, metabolism and catabolism, cellular migration and differentiation, and expression regulation. Notably, terms including the words “neuron” or “axonogenesis” were also enriched. Complementary literature screening uncovered many connections to human developmental (autism spectrum disease, schizophrenia, Down syndrome, agenesis of corpus callosum, trismus-pseudocamptodactyly, ankyloglossia, facial dysmorphology) and neurodegenerative diseases and disorders (Alzheimer’s, Parkinson’s, and Huntington’s diseases, Lewy body dementia, amyotrophic lateral sclerosis). Links to deafness and dyslexia were detected, too. Such relations existed for single proteins (e.g., DCDC2, NURR1, PHOX2B, MYH8, and MYH13) and groups of proteins which conjointly function in mRNA processing, ribosomal recruitment, cell–cell adhesion (e.g., CDH4), cytoskeleton organization, neuro-inflammation, and processing of amyloid precursor protein. Conspicuously, many links pointed to an involvement of the FOXP2-driven network in JAK/STAT signaling and the regulation of the ezrin–radixin–moesin complex. Altogether, the applied phylogenetic perspective substantiated FOXP2’s importance for nervous system development, maintenance, and functioning. However, the study also disclosed new regulatory pathways that might prove to be useful for understanding the molecular background of the aforementioned developmental disorders and neurodegenerative diseases. |
topic |
language speech brain schizophrenia Parkinson’s disease Alzheimer’s disease |
url |
http://journal.frontiersin.org/article/10.3389/fncel.2017.00212/full |
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