Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin

Fungal laccases play important roles in the degradation of lignocellulose. Although some PoLacs have been reported in several studies, still no comprehensive bioinformatics study of the LAC family in Pleurotus ostreatus has been reported. In this study, we identified 12 laccase genes in the whole ge...

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Main Authors: Xiaoyu Jiao, Guoqing Li, Yan Wang, Fan Nie, Xi Cheng, Muhammad Abdullah, Yi Lin, Yongping Cai
Format: Article
Language:English
Published: MDPI AG 2018-04-01
Series:Molecules
Subjects:
Online Access:http://www.mdpi.com/1420-3049/23/4/880
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spelling doaj-cab6d864e28340d0ae60234e0b1bb4f02020-11-24T23:53:25ZengMDPI AGMolecules1420-30492018-04-0123488010.3390/molecules23040880molecules23040880Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw LigninXiaoyu Jiao0Guoqing Li1Yan Wang2Fan Nie3Xi Cheng4Muhammad Abdullah5Yi Lin6Yongping Cai7School of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaSchool of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaSchool of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaHorticultural Institute, Anhui Academy of Agricultural Sciences, Hefei 230031, ChinaSchool of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaSchool of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaSchool of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaSchool of Life Sciences, Anhui Agricultural University, No. 130, Changjiang West Road, Hefei 230036, ChinaFungal laccases play important roles in the degradation of lignocellulose. Although some PoLacs have been reported in several studies, still no comprehensive bioinformatics study of the LAC family in Pleurotus ostreatus has been reported. In this study, we identified 12 laccase genes in the whole genome sequence of P. ostreatus and their physical characteristics, gene distribution, phylogenic relationships, gene structure, conserved motifs, and cis-elements were also analyzed. The expression patterns of 12 PoLac genes at different developmental stages and under different culture substrates were also analyzed. The results revealed that PoLac2 and PoLac12 may be involved in the degradation of lignin and the formation of the fruiting body, respectively. Subsequently, we overexpressed PoLac2 in P. ostreatus by the Agrobacterium tumefaciens-mediated transformation (ATMT) method. The transformants’ laccase activity increased in varying degrees, and the gene expression level of PoLac2 in transformants was 2–8 times higher than that of the wild-type strain. Furthermore, the lignin degradation rate by transgenic fungus over 30 days was 2.36–6.3% higher than that of wild-type. Our data show that overexpression of PoLac2 significantly enhanced the lignin degradation of cotton-straw. To our knowledge, this study is the first report to demonstrate the functions of PoLac2 in P. ostreatus.http://www.mdpi.com/1420-3049/23/4/880Pleurotus ostreatuslaccase genephylogenetic analysisexpression profilingoverexpressionlignin degradation
collection DOAJ
language English
format Article
sources DOAJ
author Xiaoyu Jiao
Guoqing Li
Yan Wang
Fan Nie
Xi Cheng
Muhammad Abdullah
Yi Lin
Yongping Cai
spellingShingle Xiaoyu Jiao
Guoqing Li
Yan Wang
Fan Nie
Xi Cheng
Muhammad Abdullah
Yi Lin
Yongping Cai
Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin
Molecules
Pleurotus ostreatus
laccase gene
phylogenetic analysis
expression profiling
overexpression
lignin degradation
author_facet Xiaoyu Jiao
Guoqing Li
Yan Wang
Fan Nie
Xi Cheng
Muhammad Abdullah
Yi Lin
Yongping Cai
author_sort Xiaoyu Jiao
title Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin
title_short Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin
title_full Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin
title_fullStr Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin
title_full_unstemmed Systematic Analysis of the Pleurotus ostreatus Laccase Gene (PoLac) Family and Functional Characterization of PoLac2 Involved in the Degradation of Cotton-Straw Lignin
title_sort systematic analysis of the pleurotus ostreatus laccase gene (polac) family and functional characterization of polac2 involved in the degradation of cotton-straw lignin
publisher MDPI AG
series Molecules
issn 1420-3049
publishDate 2018-04-01
description Fungal laccases play important roles in the degradation of lignocellulose. Although some PoLacs have been reported in several studies, still no comprehensive bioinformatics study of the LAC family in Pleurotus ostreatus has been reported. In this study, we identified 12 laccase genes in the whole genome sequence of P. ostreatus and their physical characteristics, gene distribution, phylogenic relationships, gene structure, conserved motifs, and cis-elements were also analyzed. The expression patterns of 12 PoLac genes at different developmental stages and under different culture substrates were also analyzed. The results revealed that PoLac2 and PoLac12 may be involved in the degradation of lignin and the formation of the fruiting body, respectively. Subsequently, we overexpressed PoLac2 in P. ostreatus by the Agrobacterium tumefaciens-mediated transformation (ATMT) method. The transformants’ laccase activity increased in varying degrees, and the gene expression level of PoLac2 in transformants was 2–8 times higher than that of the wild-type strain. Furthermore, the lignin degradation rate by transgenic fungus over 30 days was 2.36–6.3% higher than that of wild-type. Our data show that overexpression of PoLac2 significantly enhanced the lignin degradation of cotton-straw. To our knowledge, this study is the first report to demonstrate the functions of PoLac2 in P. ostreatus.
topic Pleurotus ostreatus
laccase gene
phylogenetic analysis
expression profiling
overexpression
lignin degradation
url http://www.mdpi.com/1420-3049/23/4/880
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