Sequence data analysis and preprocessing for oligo probe design in microbial genomes

Sequence data analysis and preprocessing for oligo probe design in microbial genomes

A good oligo probe design in DNA microarray experiments is crucial to obtain the better results of gene expression analysis. However, sequence data from a very large microbial genome or pan-genome will produce a reduced number of oligos and affect the design quality if processed by a probe designer....

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Bibliographic Details
Main Authors: Ruming Li, Brian Fristensky, Guixue Wang
Format: Article
Language:English
Published: AIMS Press 2017-01-01
Series:AIMS Bioengineering
Subjects:
sequence data analysis
gene sequence pre-processing
ORF purging
ORF segmentation
DNA microarray
oligo probe design
oligo probe quantity
oligo probe quality
Online Access:http://www.aimspress.com/Bioengineering/article/1189/fulltext.html

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http://www.aimspress.com/Bioengineering/article/1189/fulltext.html

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