Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
Carbon nanotubes (CNTs) are extensively adopted in the applications of biotechnology and biomedicine. Their interactions with cell membranes are of great importance for understanding the toxicity of CNTs and the application of drug delivery. In this paper, we use atomic molecular dynamics simulation...
Main Authors: | , , , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
MDPI AG
2019-10-01
|
Series: | Applied Sciences |
Subjects: | |
Online Access: | https://www.mdpi.com/2076-3417/9/20/4271 |
id |
doaj-c9c519962e1d440490878a292a6fafa5 |
---|---|
record_format |
Article |
spelling |
doaj-c9c519962e1d440490878a292a6fafa52020-11-25T02:03:41ZengMDPI AGApplied Sciences2076-34172019-10-01920427110.3390/app9204271app9204271Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic MoleculesYiyi Gao0Dangxin Mao1Jun Wu2Xiaogang Wang3Zhikun Wang4Guoquan Zhou5Liang Chen6Junlang Chen7Songwei Zeng8Department of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaSchool of Information and Industry, Zhejiang A&F University, Lin’an 311300, ChinaCarbon nanotubes (CNTs) are extensively adopted in the applications of biotechnology and biomedicine. Their interactions with cell membranes are of great importance for understanding the toxicity of CNTs and the application of drug delivery. In this paper, we use atomic molecular dynamics simulations to study the permeation and orientation of pristine and functionalized CNTs in a lipid bilayer. Pristine CNT (PCNT) can readily permeate into the membrane and reside in the hydrophobic region without specific orientation. The insertion of PCNTs into the lipid bilayer is robust and independent on the lengths of PCNTs. Due to the presence of hydroxyl groups on both ends of the functionalized CNT (FCNT), FCNT prefers to stand upright in the lipid bilayer center. Compared with PCNT, FCNT is more suitable to be a bridge connecting the inner and outer lipid membrane. The inserted CNTs have no distinct effects on membrane structure. However, they may block the ion channels. In addition, preliminary explorations on the transport properties of CNTs show that the small hydrophobic molecule carbon dioxide can enter both PCNT and FCNT hollow channels. However, hydrophilic molecule urea is prone to penetrate the PCNT but finds it difficult to enter the FCNT. These results may provide new insights into the internalization of CNT in the lipid membrane and the transport properties of CNTs when embedded therein.https://www.mdpi.com/2076-3417/9/20/4271carbon nanotubelipid bilayertranslocationmolecular dynamics simulation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yiyi Gao Dangxin Mao Jun Wu Xiaogang Wang Zhikun Wang Guoquan Zhou Liang Chen Junlang Chen Songwei Zeng |
spellingShingle |
Yiyi Gao Dangxin Mao Jun Wu Xiaogang Wang Zhikun Wang Guoquan Zhou Liang Chen Junlang Chen Songwei Zeng Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules Applied Sciences carbon nanotube lipid bilayer translocation molecular dynamics simulation |
author_facet |
Yiyi Gao Dangxin Mao Jun Wu Xiaogang Wang Zhikun Wang Guoquan Zhou Liang Chen Junlang Chen Songwei Zeng |
author_sort |
Yiyi Gao |
title |
Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules |
title_short |
Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules |
title_full |
Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules |
title_fullStr |
Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules |
title_full_unstemmed |
Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules |
title_sort |
carbon nanotubes translocation through a lipid membrane and transporting small hydrophobic and hydrophilic molecules |
publisher |
MDPI AG |
series |
Applied Sciences |
issn |
2076-3417 |
publishDate |
2019-10-01 |
description |
Carbon nanotubes (CNTs) are extensively adopted in the applications of biotechnology and biomedicine. Their interactions with cell membranes are of great importance for understanding the toxicity of CNTs and the application of drug delivery. In this paper, we use atomic molecular dynamics simulations to study the permeation and orientation of pristine and functionalized CNTs in a lipid bilayer. Pristine CNT (PCNT) can readily permeate into the membrane and reside in the hydrophobic region without specific orientation. The insertion of PCNTs into the lipid bilayer is robust and independent on the lengths of PCNTs. Due to the presence of hydroxyl groups on both ends of the functionalized CNT (FCNT), FCNT prefers to stand upright in the lipid bilayer center. Compared with PCNT, FCNT is more suitable to be a bridge connecting the inner and outer lipid membrane. The inserted CNTs have no distinct effects on membrane structure. However, they may block the ion channels. In addition, preliminary explorations on the transport properties of CNTs show that the small hydrophobic molecule carbon dioxide can enter both PCNT and FCNT hollow channels. However, hydrophilic molecule urea is prone to penetrate the PCNT but finds it difficult to enter the FCNT. These results may provide new insights into the internalization of CNT in the lipid membrane and the transport properties of CNTs when embedded therein. |
topic |
carbon nanotube lipid bilayer translocation molecular dynamics simulation |
url |
https://www.mdpi.com/2076-3417/9/20/4271 |
work_keys_str_mv |
AT yiyigao carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT dangxinmao carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT junwu carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT xiaogangwang carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT zhikunwang carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT guoquanzhou carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT liangchen carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT junlangchen carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules AT songweizeng carbonnanotubestranslocationthroughalipidmembraneandtransportingsmallhydrophobicandhydrophilicmolecules |
_version_ |
1724946482253004800 |