Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules

Carbon nanotubes (CNTs) are extensively adopted in the applications of biotechnology and biomedicine. Their interactions with cell membranes are of great importance for understanding the toxicity of CNTs and the application of drug delivery. In this paper, we use atomic molecular dynamics simulation...

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Main Authors: Yiyi Gao, Dangxin Mao, Jun Wu, Xiaogang Wang, Zhikun Wang, Guoquan Zhou, Liang Chen, Junlang Chen, Songwei Zeng
Format: Article
Language:English
Published: MDPI AG 2019-10-01
Series:Applied Sciences
Subjects:
Online Access:https://www.mdpi.com/2076-3417/9/20/4271
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spelling doaj-c9c519962e1d440490878a292a6fafa52020-11-25T02:03:41ZengMDPI AGApplied Sciences2076-34172019-10-01920427110.3390/app9204271app9204271Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic MoleculesYiyi Gao0Dangxin Mao1Jun Wu2Xiaogang Wang3Zhikun Wang4Guoquan Zhou5Liang Chen6Junlang Chen7Songwei Zeng8Department of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaDepartment of Optical Engineering, Zhejiang A&F University, Lin’an 311300, ChinaSchool of Information and Industry, Zhejiang A&F University, Lin’an 311300, ChinaCarbon nanotubes (CNTs) are extensively adopted in the applications of biotechnology and biomedicine. Their interactions with cell membranes are of great importance for understanding the toxicity of CNTs and the application of drug delivery. In this paper, we use atomic molecular dynamics simulations to study the permeation and orientation of pristine and functionalized CNTs in a lipid bilayer. Pristine CNT (PCNT) can readily permeate into the membrane and reside in the hydrophobic region without specific orientation. The insertion of PCNTs into the lipid bilayer is robust and independent on the lengths of PCNTs. Due to the presence of hydroxyl groups on both ends of the functionalized CNT (FCNT), FCNT prefers to stand upright in the lipid bilayer center. Compared with PCNT, FCNT is more suitable to be a bridge connecting the inner and outer lipid membrane. The inserted CNTs have no distinct effects on membrane structure. However, they may block the ion channels. In addition, preliminary explorations on the transport properties of CNTs show that the small hydrophobic molecule carbon dioxide can enter both PCNT and FCNT hollow channels. However, hydrophilic molecule urea is prone to penetrate the PCNT but finds it difficult to enter the FCNT. These results may provide new insights into the internalization of CNT in the lipid membrane and the transport properties of CNTs when embedded therein.https://www.mdpi.com/2076-3417/9/20/4271carbon nanotubelipid bilayertranslocationmolecular dynamics simulation
collection DOAJ
language English
format Article
sources DOAJ
author Yiyi Gao
Dangxin Mao
Jun Wu
Xiaogang Wang
Zhikun Wang
Guoquan Zhou
Liang Chen
Junlang Chen
Songwei Zeng
spellingShingle Yiyi Gao
Dangxin Mao
Jun Wu
Xiaogang Wang
Zhikun Wang
Guoquan Zhou
Liang Chen
Junlang Chen
Songwei Zeng
Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
Applied Sciences
carbon nanotube
lipid bilayer
translocation
molecular dynamics simulation
author_facet Yiyi Gao
Dangxin Mao
Jun Wu
Xiaogang Wang
Zhikun Wang
Guoquan Zhou
Liang Chen
Junlang Chen
Songwei Zeng
author_sort Yiyi Gao
title Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
title_short Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
title_full Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
title_fullStr Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
title_full_unstemmed Carbon Nanotubes Translocation through a Lipid Membrane and Transporting Small Hydrophobic and Hydrophilic Molecules
title_sort carbon nanotubes translocation through a lipid membrane and transporting small hydrophobic and hydrophilic molecules
publisher MDPI AG
series Applied Sciences
issn 2076-3417
publishDate 2019-10-01
description Carbon nanotubes (CNTs) are extensively adopted in the applications of biotechnology and biomedicine. Their interactions with cell membranes are of great importance for understanding the toxicity of CNTs and the application of drug delivery. In this paper, we use atomic molecular dynamics simulations to study the permeation and orientation of pristine and functionalized CNTs in a lipid bilayer. Pristine CNT (PCNT) can readily permeate into the membrane and reside in the hydrophobic region without specific orientation. The insertion of PCNTs into the lipid bilayer is robust and independent on the lengths of PCNTs. Due to the presence of hydroxyl groups on both ends of the functionalized CNT (FCNT), FCNT prefers to stand upright in the lipid bilayer center. Compared with PCNT, FCNT is more suitable to be a bridge connecting the inner and outer lipid membrane. The inserted CNTs have no distinct effects on membrane structure. However, they may block the ion channels. In addition, preliminary explorations on the transport properties of CNTs show that the small hydrophobic molecule carbon dioxide can enter both PCNT and FCNT hollow channels. However, hydrophilic molecule urea is prone to penetrate the PCNT but finds it difficult to enter the FCNT. These results may provide new insights into the internalization of CNT in the lipid membrane and the transport properties of CNTs when embedded therein.
topic carbon nanotube
lipid bilayer
translocation
molecular dynamics simulation
url https://www.mdpi.com/2076-3417/9/20/4271
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