Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2

Gab2 is a scaffold protein with a crucial role in colocalizing signaling proteins and it is involved in the regulation of several important molecular pathways. SHP2 is a protein phosphatase that binds, through its two SH2 domains, specific consensus sequences presenting a phosphorylated tyrosine loc...

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Main Authors: Lorenzo Visconti, Francesca Malagrinò, Livia Pagano, Angelo Toto
Format: Article
Language:English
Published: MDPI AG 2020-06-01
Series:Life
Subjects:
Online Access:https://www.mdpi.com/2075-1729/10/6/85
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spelling doaj-c8eef5a84be24dd5906d153097af50b22020-11-25T03:11:51ZengMDPI AGLife2075-17292020-06-0110858510.3390/life10060085Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2Lorenzo Visconti0Francesca Malagrinò1Livia Pagano2Angelo Toto3Istituto Pasteur—Fondazione Cenci Bolognetti, Dipartimento di Scienze Biochimiche “A. Rossi Fanelli” and Istituto di Biologia e Patologia Molecolari del CNR, Sapienza Università di Roma, 00185 Rome, ItalyIstituto Pasteur—Fondazione Cenci Bolognetti, Dipartimento di Scienze Biochimiche “A. Rossi Fanelli” and Istituto di Biologia e Patologia Molecolari del CNR, Sapienza Università di Roma, 00185 Rome, ItalyIstituto Pasteur—Fondazione Cenci Bolognetti, Dipartimento di Scienze Biochimiche “A. Rossi Fanelli” and Istituto di Biologia e Patologia Molecolari del CNR, Sapienza Università di Roma, 00185 Rome, ItalyIstituto Pasteur—Fondazione Cenci Bolognetti, Dipartimento di Scienze Biochimiche “A. Rossi Fanelli” and Istituto di Biologia e Patologia Molecolari del CNR, Sapienza Università di Roma, 00185 Rome, ItalyGab2 is a scaffold protein with a crucial role in colocalizing signaling proteins and it is involved in the regulation of several important molecular pathways. SHP2 is a protein phosphatase that binds, through its two SH2 domains, specific consensus sequences presenting a phosphorylated tyrosine located on the disordered tail of Gab2. To shed light on the details of such a fundamental interaction for the physiology of the cell, we present a complete mutational analysis of the kinetics of binding between the N-SH2 domain of SHP2 and a peptide mimicking a specific region of Gab2. By analyzing kinetic data, we determined structural features of the transition state of the N-SH2 domain binding to Gab2, highlighting a remarkable cooperativity of the binding reaction. Furthermore, comparison of these data with ones previously obtained for another SH2 domain suggests the presence of underlying general features characterizing the binding process of SH2 domains. Data are discussed under the light of previous works on SH2 domains.https://www.mdpi.com/2075-1729/10/6/85binding kineticsintrinsically disordered proteinmutagenesis
collection DOAJ
language English
format Article
sources DOAJ
author Lorenzo Visconti
Francesca Malagrinò
Livia Pagano
Angelo Toto
spellingShingle Lorenzo Visconti
Francesca Malagrinò
Livia Pagano
Angelo Toto
Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2
Life
binding kinetics
intrinsically disordered protein
mutagenesis
author_facet Lorenzo Visconti
Francesca Malagrinò
Livia Pagano
Angelo Toto
author_sort Lorenzo Visconti
title Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2
title_short Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2
title_full Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2
title_fullStr Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2
title_full_unstemmed Understanding the Mechanism of Recognition of Gab2 by the N-SH2 Domain of SHP2
title_sort understanding the mechanism of recognition of gab2 by the n-sh2 domain of shp2
publisher MDPI AG
series Life
issn 2075-1729
publishDate 2020-06-01
description Gab2 is a scaffold protein with a crucial role in colocalizing signaling proteins and it is involved in the regulation of several important molecular pathways. SHP2 is a protein phosphatase that binds, through its two SH2 domains, specific consensus sequences presenting a phosphorylated tyrosine located on the disordered tail of Gab2. To shed light on the details of such a fundamental interaction for the physiology of the cell, we present a complete mutational analysis of the kinetics of binding between the N-SH2 domain of SHP2 and a peptide mimicking a specific region of Gab2. By analyzing kinetic data, we determined structural features of the transition state of the N-SH2 domain binding to Gab2, highlighting a remarkable cooperativity of the binding reaction. Furthermore, comparison of these data with ones previously obtained for another SH2 domain suggests the presence of underlying general features characterizing the binding process of SH2 domains. Data are discussed under the light of previous works on SH2 domains.
topic binding kinetics
intrinsically disordered protein
mutagenesis
url https://www.mdpi.com/2075-1729/10/6/85
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