Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01
Abstract Komagataeibacter nataicola is an acetic acid bacterium (AAB) that can produce abundant bacterial cellulose and tolerate high concentrations of acetic acid. To globally understand its fermentation characteristics, we present a high-quality complete genome sequence of K. nataicola RZS01. The...
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doaj-c785f98fae264c4b9f42591493daa0212020-12-08T03:13:38ZengNature Publishing GroupScientific Reports2045-23222017-06-01711810.1038/s41598-017-04589-6Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01Heng Zhang0Xuran Xu1Xiao Chen2Fanshu Yuan3Bianjing Sun4Yunhua Xu5Jiazhi Yang6Dongping Sun7Chemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyChemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyChemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyChemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyChemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyDepartment of Life Sciences, Lianyungang Normal CollegeChemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyChemicobiology and Functional Materials Institute, Nanjing University of Science and TechnologyAbstract Komagataeibacter nataicola is an acetic acid bacterium (AAB) that can produce abundant bacterial cellulose and tolerate high concentrations of acetic acid. To globally understand its fermentation characteristics, we present a high-quality complete genome sequence of K. nataicola RZS01. The genome consists of a 3,485,191-bp chromosome and 6 plasmids, which encode 3,514 proteins and bear three cellulose synthase operons. Phylogenetic analysis at the genome level provides convincing evidence of the evolutionary position of K. nataicola with respect to related taxa. Genomic comparisons with other AAB revealed that RZS01 shares 36.1%~75.1% of sequence similarity with other AAB. The sequence data was also used for metabolic analysis of biotechnological substrates. Analysis of the resistance to acetic acid at the genomic level indicated a synergistic mechanism responsible for acetic acid tolerance. The genomic data provide a viable platform that can be used to understand and manipulate the phenotype of K. nataicola RZS01 to further improve bacterial cellulose production.https://doi.org/10.1038/s41598-017-04589-6 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Heng Zhang Xuran Xu Xiao Chen Fanshu Yuan Bianjing Sun Yunhua Xu Jiazhi Yang Dongping Sun |
spellingShingle |
Heng Zhang Xuran Xu Xiao Chen Fanshu Yuan Bianjing Sun Yunhua Xu Jiazhi Yang Dongping Sun Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01 Scientific Reports |
author_facet |
Heng Zhang Xuran Xu Xiao Chen Fanshu Yuan Bianjing Sun Yunhua Xu Jiazhi Yang Dongping Sun |
author_sort |
Heng Zhang |
title |
Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01 |
title_short |
Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01 |
title_full |
Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01 |
title_fullStr |
Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01 |
title_full_unstemmed |
Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01 |
title_sort |
complete genome sequence of the cellulose-producing strain komagataeibacter nataicola rzs01 |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2017-06-01 |
description |
Abstract Komagataeibacter nataicola is an acetic acid bacterium (AAB) that can produce abundant bacterial cellulose and tolerate high concentrations of acetic acid. To globally understand its fermentation characteristics, we present a high-quality complete genome sequence of K. nataicola RZS01. The genome consists of a 3,485,191-bp chromosome and 6 plasmids, which encode 3,514 proteins and bear three cellulose synthase operons. Phylogenetic analysis at the genome level provides convincing evidence of the evolutionary position of K. nataicola with respect to related taxa. Genomic comparisons with other AAB revealed that RZS01 shares 36.1%~75.1% of sequence similarity with other AAB. The sequence data was also used for metabolic analysis of biotechnological substrates. Analysis of the resistance to acetic acid at the genomic level indicated a synergistic mechanism responsible for acetic acid tolerance. The genomic data provide a viable platform that can be used to understand and manipulate the phenotype of K. nataicola RZS01 to further improve bacterial cellulose production. |
url |
https://doi.org/10.1038/s41598-017-04589-6 |
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