Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.

DNA methylation is widespread in most species, from bacteria to mammals, and is crucial for genomic imprinting, gene expression, and embryogenesis. DNA methylation occurs via two major classes of enzymatic reactions: maintenance-type methylation catalyzed by DNA (cytosine-5-)-methyltransferase (DNMT...

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Main Authors: Deivendran Rengaraj, Bo Ram Lee, Sang In Lee, Hee Won Seo, Jae Yong Han
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2011-05-01
Series:PLoS ONE
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21559294/?tool=EBI
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spelling doaj-c7629458f29d4440bf036e4dd03a27d12021-03-04T01:55:12ZengPublic Library of Science (PLoS)PLoS ONE1932-62032011-05-0165e1952410.1371/journal.pone.0019524Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.Deivendran RengarajBo Ram LeeSang In LeeHee Won SeoJae Yong HanDNA methylation is widespread in most species, from bacteria to mammals, and is crucial for genomic imprinting, gene expression, and embryogenesis. DNA methylation occurs via two major classes of enzymatic reactions: maintenance-type methylation catalyzed by DNA (cytosine-5-)-methyltransferase (DNMT) 1, and de novo methylation catalyzed by DNMT 3 alpha (DNMT3A) and -beta (DNMT3B). The expression pattern and regulation of DNMT genes in primordial germ cells (PGCs) and germ line cells has not been sufficiently established in birds. Therefore, we employed bioinformatics, RT-PCR, real-time PCR, and in situ hybridization analyses to examine the structural conservation and conserved expression patterns of chicken DNMT family genes. We further examined the regulation of a candidate de novo DNA methyltransferase gene, cDNMT3B by cotransfection of cDNMT3B 3'UTR- and cDNMT3B 3'UTR-specific miRNAs through a dual fluorescence reporter assay. All cDNMT family members were differentially detected during early embryonic development. Of interest, cDNMT3B expression was highly detected in early embryos and in PGCs. During germ line development and sexual maturation, cDNMT3B expression was reestablished in a female germ cell-specific manner. In the dual fluorescence reporter assay, cDNMT3B expression was significantly downregulated by four miRNAs: gga-miR-15c (25.82%), gga-miR-29b (30.01%), gga-miR-383 (30.0%), and gga-miR-222 (31.28%). Our data highlight the structural conservation and conserved expression patterns of chicken DNMTs. The miRNAs investigated in this study may induce downregulation of gene expression in chicken PGCs and germ cells.https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21559294/?tool=EBI
collection DOAJ
language English
format Article
sources DOAJ
author Deivendran Rengaraj
Bo Ram Lee
Sang In Lee
Hee Won Seo
Jae Yong Han
spellingShingle Deivendran Rengaraj
Bo Ram Lee
Sang In Lee
Hee Won Seo
Jae Yong Han
Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.
PLoS ONE
author_facet Deivendran Rengaraj
Bo Ram Lee
Sang In Lee
Hee Won Seo
Jae Yong Han
author_sort Deivendran Rengaraj
title Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.
title_short Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.
title_full Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.
title_fullStr Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.
title_full_unstemmed Expression patterns and miRNA regulation of DNA methyltransferases in chicken primordial germ cells.
title_sort expression patterns and mirna regulation of dna methyltransferases in chicken primordial germ cells.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2011-05-01
description DNA methylation is widespread in most species, from bacteria to mammals, and is crucial for genomic imprinting, gene expression, and embryogenesis. DNA methylation occurs via two major classes of enzymatic reactions: maintenance-type methylation catalyzed by DNA (cytosine-5-)-methyltransferase (DNMT) 1, and de novo methylation catalyzed by DNMT 3 alpha (DNMT3A) and -beta (DNMT3B). The expression pattern and regulation of DNMT genes in primordial germ cells (PGCs) and germ line cells has not been sufficiently established in birds. Therefore, we employed bioinformatics, RT-PCR, real-time PCR, and in situ hybridization analyses to examine the structural conservation and conserved expression patterns of chicken DNMT family genes. We further examined the regulation of a candidate de novo DNA methyltransferase gene, cDNMT3B by cotransfection of cDNMT3B 3'UTR- and cDNMT3B 3'UTR-specific miRNAs through a dual fluorescence reporter assay. All cDNMT family members were differentially detected during early embryonic development. Of interest, cDNMT3B expression was highly detected in early embryos and in PGCs. During germ line development and sexual maturation, cDNMT3B expression was reestablished in a female germ cell-specific manner. In the dual fluorescence reporter assay, cDNMT3B expression was significantly downregulated by four miRNAs: gga-miR-15c (25.82%), gga-miR-29b (30.01%), gga-miR-383 (30.0%), and gga-miR-222 (31.28%). Our data highlight the structural conservation and conserved expression patterns of chicken DNMTs. The miRNAs investigated in this study may induce downregulation of gene expression in chicken PGCs and germ cells.
url https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21559294/?tool=EBI
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