Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry

For decades, microorganisms in beet sugar production have been studied using culture-based methods. However, these methods are not sufficient to describe such a complex bacterial community. In this study, therefore, an amplicon-based sequencing technique (Illumina MiSeq platform) was applied to char...

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Main Authors: Cordula K. Moser, Christina Ukowitz, Ulrike Zitz, Florian Emerstorfer, Walter Hein, Wolfgang Kneifel, Konrad J. Domig
Format: Article
Language:English
Published: MDPI AG 2021-01-01
Series:Applied Sciences
Subjects:
Online Access:https://www.mdpi.com/2076-3417/11/2/737
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spelling doaj-c752ef034a804cefa7fb9d9d20ee63772021-01-15T00:00:54ZengMDPI AGApplied Sciences2076-34172021-01-011173773710.3390/app11020737Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow CytometryCordula K. Moser0Christina Ukowitz1Ulrike Zitz2Florian Emerstorfer3Walter Hein4Wolfgang Kneifel5Konrad J. Domig6AGRANA Research & Innovation Center GmbH, Department of Sugar Technology, Josef-Reither-Straße 21-23, A-3430 Tulln, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaAGRANA Research & Innovation Center GmbH, Department of Sugar Technology, Josef-Reither-Straße 21-23, A-3430 Tulln, AustriaAGRANA Research & Innovation Center GmbH, Department of Sugar Technology, Josef-Reither-Straße 21-23, A-3430 Tulln, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaFor decades, microorganisms in beet sugar production have been studied using culture-based methods. However, these methods are not sufficient to describe such a complex bacterial community. In this study, therefore, an amplicon-based sequencing technique (Illumina MiSeq platform) was applied to characterize the bacterial community and its dynamics in the extraction area and juice purification station of an Austrian beet sugar plant. Depending on the process conditions thermophilic bacteria, such as <i>Geobacillus</i> spp., <i>Caenibacillus</i> spp., and <i>Thermus</i> spp., and mesophilic bacteria, such as <i>Leuconostoc</i> spp. and <i>Bacillus</i> spp., were found. Besides these microbiological characteristics, the antimicrobial effect of a rosin acid-based product (Defostab 220) on the bacterial communities was investigated in industrial and laboratory trials. The antimicrobial effect of a given concentration of rosin acid varies from bacteriostatic to bactericidal effects on different occurring groups of bacteria.https://www.mdpi.com/2076-3417/11/2/737beet sugar factorybacterial communitiesantimicrobialrosin acidsflow cytometer
collection DOAJ
language English
format Article
sources DOAJ
author Cordula K. Moser
Christina Ukowitz
Ulrike Zitz
Florian Emerstorfer
Walter Hein
Wolfgang Kneifel
Konrad J. Domig
spellingShingle Cordula K. Moser
Christina Ukowitz
Ulrike Zitz
Florian Emerstorfer
Walter Hein
Wolfgang Kneifel
Konrad J. Domig
Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
Applied Sciences
beet sugar factory
bacterial communities
antimicrobial
rosin acids
flow cytometer
author_facet Cordula K. Moser
Christina Ukowitz
Ulrike Zitz
Florian Emerstorfer
Walter Hein
Wolfgang Kneifel
Konrad J. Domig
author_sort Cordula K. Moser
title Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
title_short Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
title_full Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
title_fullStr Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
title_full_unstemmed Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
title_sort monitoring the antibacterial effect of rosin acids in an austrian beet sugar plant by amplicon-based sequencing and flow cytometry
publisher MDPI AG
series Applied Sciences
issn 2076-3417
publishDate 2021-01-01
description For decades, microorganisms in beet sugar production have been studied using culture-based methods. However, these methods are not sufficient to describe such a complex bacterial community. In this study, therefore, an amplicon-based sequencing technique (Illumina MiSeq platform) was applied to characterize the bacterial community and its dynamics in the extraction area and juice purification station of an Austrian beet sugar plant. Depending on the process conditions thermophilic bacteria, such as <i>Geobacillus</i> spp., <i>Caenibacillus</i> spp., and <i>Thermus</i> spp., and mesophilic bacteria, such as <i>Leuconostoc</i> spp. and <i>Bacillus</i> spp., were found. Besides these microbiological characteristics, the antimicrobial effect of a rosin acid-based product (Defostab 220) on the bacterial communities was investigated in industrial and laboratory trials. The antimicrobial effect of a given concentration of rosin acid varies from bacteriostatic to bactericidal effects on different occurring groups of bacteria.
topic beet sugar factory
bacterial communities
antimicrobial
rosin acids
flow cytometer
url https://www.mdpi.com/2076-3417/11/2/737
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