Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry
For decades, microorganisms in beet sugar production have been studied using culture-based methods. However, these methods are not sufficient to describe such a complex bacterial community. In this study, therefore, an amplicon-based sequencing technique (Illumina MiSeq platform) was applied to char...
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doaj-c752ef034a804cefa7fb9d9d20ee63772021-01-15T00:00:54ZengMDPI AGApplied Sciences2076-34172021-01-011173773710.3390/app11020737Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow CytometryCordula K. Moser0Christina Ukowitz1Ulrike Zitz2Florian Emerstorfer3Walter Hein4Wolfgang Kneifel5Konrad J. Domig6AGRANA Research & Innovation Center GmbH, Department of Sugar Technology, Josef-Reither-Straße 21-23, A-3430 Tulln, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaAGRANA Research & Innovation Center GmbH, Department of Sugar Technology, Josef-Reither-Straße 21-23, A-3430 Tulln, AustriaAGRANA Research & Innovation Center GmbH, Department of Sugar Technology, Josef-Reither-Straße 21-23, A-3430 Tulln, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaDepartment of Food Science and Technology, Institute of Food Science, BOKU–University of Natural Resources and Life Sciences Vienna, Muthgasse 18, A-1190 Vienna, AustriaFor decades, microorganisms in beet sugar production have been studied using culture-based methods. However, these methods are not sufficient to describe such a complex bacterial community. In this study, therefore, an amplicon-based sequencing technique (Illumina MiSeq platform) was applied to characterize the bacterial community and its dynamics in the extraction area and juice purification station of an Austrian beet sugar plant. Depending on the process conditions thermophilic bacteria, such as <i>Geobacillus</i> spp., <i>Caenibacillus</i> spp., and <i>Thermus</i> spp., and mesophilic bacteria, such as <i>Leuconostoc</i> spp. and <i>Bacillus</i> spp., were found. Besides these microbiological characteristics, the antimicrobial effect of a rosin acid-based product (Defostab 220) on the bacterial communities was investigated in industrial and laboratory trials. The antimicrobial effect of a given concentration of rosin acid varies from bacteriostatic to bactericidal effects on different occurring groups of bacteria.https://www.mdpi.com/2076-3417/11/2/737beet sugar factorybacterial communitiesantimicrobialrosin acidsflow cytometer |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Cordula K. Moser Christina Ukowitz Ulrike Zitz Florian Emerstorfer Walter Hein Wolfgang Kneifel Konrad J. Domig |
spellingShingle |
Cordula K. Moser Christina Ukowitz Ulrike Zitz Florian Emerstorfer Walter Hein Wolfgang Kneifel Konrad J. Domig Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry Applied Sciences beet sugar factory bacterial communities antimicrobial rosin acids flow cytometer |
author_facet |
Cordula K. Moser Christina Ukowitz Ulrike Zitz Florian Emerstorfer Walter Hein Wolfgang Kneifel Konrad J. Domig |
author_sort |
Cordula K. Moser |
title |
Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry |
title_short |
Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry |
title_full |
Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry |
title_fullStr |
Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry |
title_full_unstemmed |
Monitoring the Antibacterial Effect of Rosin Acids in an Austrian Beet Sugar Plant by Amplicon-Based Sequencing and Flow Cytometry |
title_sort |
monitoring the antibacterial effect of rosin acids in an austrian beet sugar plant by amplicon-based sequencing and flow cytometry |
publisher |
MDPI AG |
series |
Applied Sciences |
issn |
2076-3417 |
publishDate |
2021-01-01 |
description |
For decades, microorganisms in beet sugar production have been studied using culture-based methods. However, these methods are not sufficient to describe such a complex bacterial community. In this study, therefore, an amplicon-based sequencing technique (Illumina MiSeq platform) was applied to characterize the bacterial community and its dynamics in the extraction area and juice purification station of an Austrian beet sugar plant. Depending on the process conditions thermophilic bacteria, such as <i>Geobacillus</i> spp., <i>Caenibacillus</i> spp., and <i>Thermus</i> spp., and mesophilic bacteria, such as <i>Leuconostoc</i> spp. and <i>Bacillus</i> spp., were found. Besides these microbiological characteristics, the antimicrobial effect of a rosin acid-based product (Defostab 220) on the bacterial communities was investigated in industrial and laboratory trials. The antimicrobial effect of a given concentration of rosin acid varies from bacteriostatic to bactericidal effects on different occurring groups of bacteria. |
topic |
beet sugar factory bacterial communities antimicrobial rosin acids flow cytometer |
url |
https://www.mdpi.com/2076-3417/11/2/737 |
work_keys_str_mv |
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