A Novel RNA Virus Related to Sobemoviruses Confers Hypovirulence on the Phytopathogenic Fungus <i>Sclerotinia sclerotiorum</i>

Infection by diverse mycoviruses is a common phenomenon in <i>Sclerotinia sclerotiorum</i>. In this study, the full genome of a single-stranded RNA mycovirus, tentatively named Hubei sclerotinia RNA virus 1 (HuSRV1), was determined in the hypovirulent strain 277 of <i>S. sclerotior...

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Bibliographic Details
Main Authors: Ayesha Azhar, Fan Mu, Huang Huang, Jiasen Cheng, Yanping Fu, Muhammad Rizwan Hamid, Daohong Jiang, Jiatao Xie
Format: Article
Language:English
Published: MDPI AG 2019-08-01
Series:Viruses
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Online Access:https://www.mdpi.com/1999-4915/11/8/759
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Summary:Infection by diverse mycoviruses is a common phenomenon in <i>Sclerotinia sclerotiorum</i>. In this study, the full genome of a single-stranded RNA mycovirus, tentatively named Hubei sclerotinia RNA virus 1 (HuSRV1), was determined in the hypovirulent strain 277 of <i>S. sclerotiorum</i>. The HuSRV1 genome is 4492 nucleotides (nt) long and lacks a poly (A) tail at the 3ˊ- terminus. Sequence analyses showed that the HuSRV1 genome contains four putative open reading frames (ORFs). ORF1a was presumed to encode a protein with a conserved protease domain and a transmembrane domain. This protein is 27% identical to the P2a protein encoded by the subterranean clover mottle virus. ORF1b encodes a protein containing a conserved RNA-dependent RNA polymerase (RdRp) domain, which may be translated into a fusion protein by a -1 ribosome frameshift. This protein is 45.9% identical to P2b encoded by the sowbane mosaic virus. ORF2 was found to encode a putative coat protein, which shares 23% identical to the coat protein encoded by the olive mild mosaic virus. ORF3 was presumed to encode a putative protein with an unknown function. Evolutionary relation analyses indicated that HuSRV1 is related to members within <i>Sobemovirus</i>, but forms a unique phylogenetic branch, suggesting that HuSRV1 represents a new member within <i>Solemoviridae</i>. HuSRV1 virions, approximately 30 nm in diameter, were purified from strain 277. The purified virions were successfully introduced into virulent strain Ep-1PNA367, resulting in a new hypovirulent strain, which confirmed that HuSRV1 confers hypovirulence on <i>S. sclerotiorum</i>.
ISSN:1999-4915