Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis

Filamentous fungi are able to synthesise a remarkable range of secondary metabolites, which play various key roles in the interaction between fungi and the rest of the biosphere, determining their ecological fitness. Many of them can have a beneficial activity to be exploited, as well as negative im...

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Main Authors: Antonia Gallo, Giancarlo Perrone
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/15/7878
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spelling doaj-c6ba47afb8a24036bf0418ea56da549f2021-08-06T15:24:37ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-07-01227878787810.3390/ijms22157878Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin BiosynthesisAntonia Gallo0Giancarlo Perrone1Institute of Sciences of Food Production (ISPA) National Research Council (CNR), 73100 Lecce, ItalyInstitute of Sciences of Food Production (ISPA) National Research Council (CNR), 70126 Bari, ItalyFilamentous fungi are able to synthesise a remarkable range of secondary metabolites, which play various key roles in the interaction between fungi and the rest of the biosphere, determining their ecological fitness. Many of them can have a beneficial activity to be exploited, as well as negative impact on human and animal health, as in the case of mycotoxins contaminating large quantities of food, feed, and agricultural products worldwide and posing serious health and economic risks. The elucidation of the molecular aspects of mycotoxin biosynthesis has been greatly sped up over the past decade due to the advent of next-generation sequencing technologies, which greatly reduced the cost of genome sequencing and related omic analyses. Here, we briefly highlight the recent progress in the use and integration of omic approaches for the study of mycotoxins biosynthesis. Particular attention has been paid to genomics and transcriptomic approaches for the identification and characterisation of biosynthetic gene clusters of mycotoxins and the understanding of the regulatory pathways activated in response to physiological and environmental factors leading to their production. The latest innovations in genome-editing technology have also provided a more powerful tool for the complete explanation of regulatory and biosynthesis pathways. Finally, we address the crucial issue of the interpretation of the combined omics data on the biology of the mycotoxigenic fungi. They are rapidly expanding and require the development of resources for more efficient integration, as well as the completeness and the availability of intertwined data for the research community.https://www.mdpi.com/1422-0067/22/15/7878filamentous fungibiosynthetic gene clusters (BGCs)genomicstranscriptomicsgenome editingomics data
collection DOAJ
language English
format Article
sources DOAJ
author Antonia Gallo
Giancarlo Perrone
spellingShingle Antonia Gallo
Giancarlo Perrone
Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis
International Journal of Molecular Sciences
filamentous fungi
biosynthetic gene clusters (BGCs)
genomics
transcriptomics
genome editing
omics data
author_facet Antonia Gallo
Giancarlo Perrone
author_sort Antonia Gallo
title Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis
title_short Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis
title_full Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis
title_fullStr Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis
title_full_unstemmed Current Approaches for Advancement in Understanding the Molecular Mechanisms of Mycotoxin Biosynthesis
title_sort current approaches for advancement in understanding the molecular mechanisms of mycotoxin biosynthesis
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2021-07-01
description Filamentous fungi are able to synthesise a remarkable range of secondary metabolites, which play various key roles in the interaction between fungi and the rest of the biosphere, determining their ecological fitness. Many of them can have a beneficial activity to be exploited, as well as negative impact on human and animal health, as in the case of mycotoxins contaminating large quantities of food, feed, and agricultural products worldwide and posing serious health and economic risks. The elucidation of the molecular aspects of mycotoxin biosynthesis has been greatly sped up over the past decade due to the advent of next-generation sequencing technologies, which greatly reduced the cost of genome sequencing and related omic analyses. Here, we briefly highlight the recent progress in the use and integration of omic approaches for the study of mycotoxins biosynthesis. Particular attention has been paid to genomics and transcriptomic approaches for the identification and characterisation of biosynthetic gene clusters of mycotoxins and the understanding of the regulatory pathways activated in response to physiological and environmental factors leading to their production. The latest innovations in genome-editing technology have also provided a more powerful tool for the complete explanation of regulatory and biosynthesis pathways. Finally, we address the crucial issue of the interpretation of the combined omics data on the biology of the mycotoxigenic fungi. They are rapidly expanding and require the development of resources for more efficient integration, as well as the completeness and the availability of intertwined data for the research community.
topic filamentous fungi
biosynthetic gene clusters (BGCs)
genomics
transcriptomics
genome editing
omics data
url https://www.mdpi.com/1422-0067/22/15/7878
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