A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans

In mammals, peroxisomes perform crucial functions in cellular metabolism, signaling and viral defense which are essential to the viability of the organism. Molecular cues triggered by changes in the cellular environment induce a dynamic response in peroxisomes, which manifests itself as a change in...

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Main Authors: Afsoon S. Azadi, Ruth E. Carmichael, Werner J. Kovacs, Janet Koster, Suzan Kors, Hans R. Waterham, Michael Schrader
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-10-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2020.577637/full
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spelling doaj-c6ac38ae243b4fa6b5de86f5087845582020-11-25T03:05:58ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2020-10-01810.3389/fcell.2020.577637577637A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in HumansAfsoon S. Azadi0Ruth E. Carmichael1Werner J. Kovacs2Janet Koster3Suzan Kors4Hans R. Waterham5Michael Schrader6Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, United KingdomBiosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, United KingdomInstitute of Molecular Health Sciences, Swiss Federal Institute of Technology in Zürich (ETH Zürich), Zurich, SwitzerlandLaboratory Genetic Metabolic Diseases, Amsterdam University Medical Centres, University of Amsterdam, Amsterdam, NetherlandsBiosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, United KingdomLaboratory Genetic Metabolic Diseases, Amsterdam University Medical Centres, University of Amsterdam, Amsterdam, NetherlandsBiosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, United KingdomIn mammals, peroxisomes perform crucial functions in cellular metabolism, signaling and viral defense which are essential to the viability of the organism. Molecular cues triggered by changes in the cellular environment induce a dynamic response in peroxisomes, which manifests itself as a change in peroxisome number, altered enzyme levels and adaptations to the peroxisomal morphology. How the regulation of this process is integrated into the cell’s response to different stimuli, including the signaling pathways and factors involved, remains unclear. Here, a cell-based peroxisome proliferation assay has been applied to investigate the ability of different stimuli to induce peroxisome proliferation. We determined that serum stimulation, long-chain fatty acid supplementation and TGFβ application all increase peroxisome elongation, a prerequisite for proliferation. Time-resolved mRNA expression during the peroxisome proliferation cycle revealed a number of peroxins whose expression correlated with peroxisome elongation, including the β isoform of PEX11, but not the α or γ isoforms. An initial map of putative regulatory motif sites in the respective promoters showed a difference between binding sites in PEX11α and PEX11β, suggesting that these genes may be regulated by distinct pathways. A functional SMAD2/3 binding site in PEX11β points to the involvement of the TGFβ signaling pathway in expression of this gene and thus peroxisome proliferation/dynamics in humans.https://www.frontiersin.org/articles/10.3389/fcell.2020.577637/fullperoxisomesorganelle dynamicstranscriptional regulationperoxinPEX11transforming growth factor beta
collection DOAJ
language English
format Article
sources DOAJ
author Afsoon S. Azadi
Ruth E. Carmichael
Werner J. Kovacs
Janet Koster
Suzan Kors
Hans R. Waterham
Michael Schrader
spellingShingle Afsoon S. Azadi
Ruth E. Carmichael
Werner J. Kovacs
Janet Koster
Suzan Kors
Hans R. Waterham
Michael Schrader
A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans
Frontiers in Cell and Developmental Biology
peroxisomes
organelle dynamics
transcriptional regulation
peroxin
PEX11
transforming growth factor beta
author_facet Afsoon S. Azadi
Ruth E. Carmichael
Werner J. Kovacs
Janet Koster
Suzan Kors
Hans R. Waterham
Michael Schrader
author_sort Afsoon S. Azadi
title A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans
title_short A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans
title_full A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans
title_fullStr A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans
title_full_unstemmed A Functional SMAD2/3 Binding Site in the PEX11β Promoter Identifies a Role for TGFβ in Peroxisome Proliferation in Humans
title_sort functional smad2/3 binding site in the pex11β promoter identifies a role for tgfβ in peroxisome proliferation in humans
publisher Frontiers Media S.A.
series Frontiers in Cell and Developmental Biology
issn 2296-634X
publishDate 2020-10-01
description In mammals, peroxisomes perform crucial functions in cellular metabolism, signaling and viral defense which are essential to the viability of the organism. Molecular cues triggered by changes in the cellular environment induce a dynamic response in peroxisomes, which manifests itself as a change in peroxisome number, altered enzyme levels and adaptations to the peroxisomal morphology. How the regulation of this process is integrated into the cell’s response to different stimuli, including the signaling pathways and factors involved, remains unclear. Here, a cell-based peroxisome proliferation assay has been applied to investigate the ability of different stimuli to induce peroxisome proliferation. We determined that serum stimulation, long-chain fatty acid supplementation and TGFβ application all increase peroxisome elongation, a prerequisite for proliferation. Time-resolved mRNA expression during the peroxisome proliferation cycle revealed a number of peroxins whose expression correlated with peroxisome elongation, including the β isoform of PEX11, but not the α or γ isoforms. An initial map of putative regulatory motif sites in the respective promoters showed a difference between binding sites in PEX11α and PEX11β, suggesting that these genes may be regulated by distinct pathways. A functional SMAD2/3 binding site in PEX11β points to the involvement of the TGFβ signaling pathway in expression of this gene and thus peroxisome proliferation/dynamics in humans.
topic peroxisomes
organelle dynamics
transcriptional regulation
peroxin
PEX11
transforming growth factor beta
url https://www.frontiersin.org/articles/10.3389/fcell.2020.577637/full
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