Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro

Phenolic compounds and carotenoids are potential inhibitors of cytochrome P450s. Sixteen known compounds, phenolic compounds and carotenoids from seaweed were examined for potential inhibitory capacity against CYP1A2 and CYP3A4 in silico and in vitro. Morin, quercetin, and fucoxanthin inhibited the...

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Main Authors: Sung-Kun Yim, Kian Kim, SangHo Chun, TaeHawn Oh, WooHuk Jung, KyooJin Jung, Chul-Ho Yun
Format: Article
Language:English
Published: MDPI AG 2020-11-01
Series:Marine Drugs
Subjects:
Online Access:https://www.mdpi.com/1660-3397/18/12/603
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spelling doaj-c5ec8199f9924c7a826492f433342d852020-11-30T00:01:28ZengMDPI AGMarine Drugs1660-33972020-11-011860360310.3390/md18120603Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In VitroSung-Kun Yim0Kian Kim1SangHo Chun2TaeHawn Oh3WooHuk Jung4KyooJin Jung5Chul-Ho Yun6Marine Biotechnology Research Center, Jeonnam Bioindustry Foundation, 21-7, Nonggongdanji 4Gil, Wando-eup, Wando-gun, Jeollanam-do 59108, KoreaMarine Biotechnology Research Center, Jeonnam Bioindustry Foundation, 21-7, Nonggongdanji 4Gil, Wando-eup, Wando-gun, Jeollanam-do 59108, KoreaMarine Biotechnology Research Center, Jeonnam Bioindustry Foundation, 21-7, Nonggongdanji 4Gil, Wando-eup, Wando-gun, Jeollanam-do 59108, KoreaMarine Biotechnology Research Center, Jeonnam Bioindustry Foundation, 21-7, Nonggongdanji 4Gil, Wando-eup, Wando-gun, Jeollanam-do 59108, KoreaMarine Biotechnology Research Center, Jeonnam Bioindustry Foundation, 21-7, Nonggongdanji 4Gil, Wando-eup, Wando-gun, Jeollanam-do 59108, KoreaMarine Biotechnology Research Center, Jeonnam Bioindustry Foundation, 21-7, Nonggongdanji 4Gil, Wando-eup, Wando-gun, Jeollanam-do 59108, KoreaSchool of Biological Sciences and Technology, Chonnam National University, Gwangju 61186, KoreaPhenolic compounds and carotenoids are potential inhibitors of cytochrome P450s. Sixteen known compounds, phenolic compounds and carotenoids from seaweed were examined for potential inhibitory capacity against CYP1A2 and CYP3A4 in silico and in vitro. Morin, quercetin, and fucoxanthin inhibited the enzyme activity of CYP1A2 and CYP3A4 in a dose-dependent manner. The IC<sub>50</sub> values of morin, quercetin, and fucoxanthin were 41.8, 22.5, and 30.3 μM for CYP1A2 and 86.6, 16.1, and 24.4 μM for CYP3A4, respectively. Siphonaxanthin and hesperidin did not show any significant effect on CYP1A2, but they slightly inhibited CYP3A4 activity at high concentrations. In silico modeling of CYP’s binding site revealed that the potential inhibitors bound in the cavity located above the distal surface of the heme prosthetic group through the 2a or 2f channel of CYPs. This study presents an approach for quickly predicting CYP inhibitory activity and shows the potential interactions of compounds and CYPs through in silico modeling.https://www.mdpi.com/1660-3397/18/12/603cytochrome P450phenolic compoundcarotenoidinhibitor predictionmolecular docking
collection DOAJ
language English
format Article
sources DOAJ
author Sung-Kun Yim
Kian Kim
SangHo Chun
TaeHawn Oh
WooHuk Jung
KyooJin Jung
Chul-Ho Yun
spellingShingle Sung-Kun Yim
Kian Kim
SangHo Chun
TaeHawn Oh
WooHuk Jung
KyooJin Jung
Chul-Ho Yun
Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
Marine Drugs
cytochrome P450
phenolic compound
carotenoid
inhibitor prediction
molecular docking
author_facet Sung-Kun Yim
Kian Kim
SangHo Chun
TaeHawn Oh
WooHuk Jung
KyooJin Jung
Chul-Ho Yun
author_sort Sung-Kun Yim
title Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
title_short Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
title_full Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
title_fullStr Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
title_full_unstemmed Screening of Human CYP1A2 and CYP3A4 Inhibitors from Seaweed In Silico and In Vitro
title_sort screening of human cyp1a2 and cyp3a4 inhibitors from seaweed in silico and in vitro
publisher MDPI AG
series Marine Drugs
issn 1660-3397
publishDate 2020-11-01
description Phenolic compounds and carotenoids are potential inhibitors of cytochrome P450s. Sixteen known compounds, phenolic compounds and carotenoids from seaweed were examined for potential inhibitory capacity against CYP1A2 and CYP3A4 in silico and in vitro. Morin, quercetin, and fucoxanthin inhibited the enzyme activity of CYP1A2 and CYP3A4 in a dose-dependent manner. The IC<sub>50</sub> values of morin, quercetin, and fucoxanthin were 41.8, 22.5, and 30.3 μM for CYP1A2 and 86.6, 16.1, and 24.4 μM for CYP3A4, respectively. Siphonaxanthin and hesperidin did not show any significant effect on CYP1A2, but they slightly inhibited CYP3A4 activity at high concentrations. In silico modeling of CYP’s binding site revealed that the potential inhibitors bound in the cavity located above the distal surface of the heme prosthetic group through the 2a or 2f channel of CYPs. This study presents an approach for quickly predicting CYP inhibitory activity and shows the potential interactions of compounds and CYPs through in silico modeling.
topic cytochrome P450
phenolic compound
carotenoid
inhibitor prediction
molecular docking
url https://www.mdpi.com/1660-3397/18/12/603
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