Discrimination of Shark species by simple PCR of 5S rDNA repeats

Sharks are suffering from intensive exploitation by worldwide fisheries leading to a severe decline in several populations in the last decades. The lack of biological data on a species-specific basis, associated with a k-strategist life history make it difficult to correctly manage and conserve thes...

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Main Authors: Danillo Pinhal, Otto BF Gadig, Adriane P Wasko, Claudio Oliveira, Ernesto Ron, Fausto Foresti, Cesar Martins
Format: Article
Language:English
Published: Sociedade Brasileira de Genética 2008-01-01
Series:Genetics and Molecular Biology
Subjects:
PCR
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200033
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spelling doaj-c5e2aa2b96e44bbb928b0c2118796fb62020-11-25T02:18:41ZengSociedade Brasileira de GenéticaGenetics and Molecular Biology1415-47571678-46852008-01-0131136136510.1590/S1415-47572008000200033Discrimination of Shark species by simple PCR of 5S rDNA repeatsDanillo PinhalOtto BF GadigAdriane P WaskoClaudio OliveiraErnesto RonFausto ForestiCesar MartinsSharks are suffering from intensive exploitation by worldwide fisheries leading to a severe decline in several populations in the last decades. The lack of biological data on a species-specific basis, associated with a k-strategist life history make it difficult to correctly manage and conserve these animals. The aim of the present study was to develop a DNA-based procedure to discriminate shark species by means of a rapid, low cost and easily applicable PCR analysis based on 5S rDNA repeat units amplification, in order to contribute conservation management of these animals. The generated agarose electrophoresis band patterns allowed to unequivocally distinguish eight shark species. The data showed for the first time that a simple PCR is able to discriminate elasmobranch species. The described 5S rDNA PCR approach generated species-specific genetic markers that should find broad application in fishery management and trade of sharks and their subproducts.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200033ChondrichthyesPCRspecies identification5S rDNAsharks
collection DOAJ
language English
format Article
sources DOAJ
author Danillo Pinhal
Otto BF Gadig
Adriane P Wasko
Claudio Oliveira
Ernesto Ron
Fausto Foresti
Cesar Martins
spellingShingle Danillo Pinhal
Otto BF Gadig
Adriane P Wasko
Claudio Oliveira
Ernesto Ron
Fausto Foresti
Cesar Martins
Discrimination of Shark species by simple PCR of 5S rDNA repeats
Genetics and Molecular Biology
Chondrichthyes
PCR
species identification
5S rDNA
sharks
author_facet Danillo Pinhal
Otto BF Gadig
Adriane P Wasko
Claudio Oliveira
Ernesto Ron
Fausto Foresti
Cesar Martins
author_sort Danillo Pinhal
title Discrimination of Shark species by simple PCR of 5S rDNA repeats
title_short Discrimination of Shark species by simple PCR of 5S rDNA repeats
title_full Discrimination of Shark species by simple PCR of 5S rDNA repeats
title_fullStr Discrimination of Shark species by simple PCR of 5S rDNA repeats
title_full_unstemmed Discrimination of Shark species by simple PCR of 5S rDNA repeats
title_sort discrimination of shark species by simple pcr of 5s rdna repeats
publisher Sociedade Brasileira de Genética
series Genetics and Molecular Biology
issn 1415-4757
1678-4685
publishDate 2008-01-01
description Sharks are suffering from intensive exploitation by worldwide fisheries leading to a severe decline in several populations in the last decades. The lack of biological data on a species-specific basis, associated with a k-strategist life history make it difficult to correctly manage and conserve these animals. The aim of the present study was to develop a DNA-based procedure to discriminate shark species by means of a rapid, low cost and easily applicable PCR analysis based on 5S rDNA repeat units amplification, in order to contribute conservation management of these animals. The generated agarose electrophoresis band patterns allowed to unequivocally distinguish eight shark species. The data showed for the first time that a simple PCR is able to discriminate elasmobranch species. The described 5S rDNA PCR approach generated species-specific genetic markers that should find broad application in fishery management and trade of sharks and their subproducts.
topic Chondrichthyes
PCR
species identification
5S rDNA
sharks
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000200033
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