A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects

We study the discrete and discrete fractional representation of a pharmacokinetics - pharmacodynamics (PK-PD) model describing tumor growth and anti-cancer effects in continuous time considering a time scale hℕ0h$h\mathbb{N}_0^h$, where h > 0. Since the measurements of the tumor volume in mice we...

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Main Authors: Atıcı Ferhan M., Atıcı Mustafa, Nguyen Ngoc, Zhoroev Tilekbek, Koch Gilbert
Format: Article
Language:English
Published: De Gruyter 2019-08-01
Series:Computational and Mathematical Biophysics
Subjects:
Online Access:https://doi.org/10.1515/cmb-2019-0002
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spelling doaj-c4d2993be96042a3b1cfa242f7138e582021-09-06T19:19:41ZengDe GruyterComputational and Mathematical Biophysics2544-72972019-08-0171102410.1515/cmb-2019-0002A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effectsAtıcı Ferhan M.0Atıcı Mustafa1Nguyen Ngoc2Zhoroev Tilekbek3Koch Gilbert4Department of Mathematics, Western Kentucky University, Bowling Green, Kentucky 42101-3576 USASchool of Engineering and Applied Sciences, Western Kentucky University, Bowling Green, Kentucky 42101-3576 USADepartment of Mathematics, Western Kentucky University, Bowling Green, Kentucky 42101-3576 USADepartment of Mathematics, Western Kentucky University, Bowling Green, Kentucky 42101-3576 USAPediatric Clinical Pharmacology, University Children’s Hospital, Basel, SwitzerlandWe study the discrete and discrete fractional representation of a pharmacokinetics - pharmacodynamics (PK-PD) model describing tumor growth and anti-cancer effects in continuous time considering a time scale hℕ0h$h\mathbb{N}_0^h$, where h > 0. Since the measurements of the tumor volume in mice were taken daily, we consider h = 1 and obtain the model in discrete time (i.e. daily). We then continue with fractionalizing the discrete nabla operator to obtain the model as a system of nabla fractional difference equations. The nabla fractional difference operator is considered in the sense of Riemann-Liouville definition of the fractional derivative. In order to solve the fractional discrete system analytically we state and prove some theorems in the theory of discrete fractional calculus. For the data fitting purpose, we use a new developed method which is known as an improved version of the partial sum method to estimate the parameters for discrete and discrete fractional models. Sensitivity analysis is conducted to incorporate uncertainty/noise into the model. We employ both frequentist approach and Bayesian method to construct 90 percent confidence intervals for the parameters. Lastly, for the purpose of practicality, we test the discrete models for their efficiency and illustrate their current limitations for application.https://doi.org/10.1515/cmb-2019-0002discrete fractional calculusparameter estimationsdata fittingsensitivity analysismarkov chain monte carlorandom walk metropolisdelayed rejection adaptive metropolis39a1234a2526a3362g0565c0565c20
collection DOAJ
language English
format Article
sources DOAJ
author Atıcı Ferhan M.
Atıcı Mustafa
Nguyen Ngoc
Zhoroev Tilekbek
Koch Gilbert
spellingShingle Atıcı Ferhan M.
Atıcı Mustafa
Nguyen Ngoc
Zhoroev Tilekbek
Koch Gilbert
A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
Computational and Mathematical Biophysics
discrete fractional calculus
parameter estimations
data fitting
sensitivity analysis
markov chain monte carlo
random walk metropolis
delayed rejection adaptive metropolis
39a12
34a25
26a33
62g05
65c05
65c20
author_facet Atıcı Ferhan M.
Atıcı Mustafa
Nguyen Ngoc
Zhoroev Tilekbek
Koch Gilbert
author_sort Atıcı Ferhan M.
title A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
title_short A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
title_full A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
title_fullStr A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
title_full_unstemmed A study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
title_sort study on discrete and discrete fractional pharmacokinetics-pharmacodynamics models for tumor growth and anti-cancer effects
publisher De Gruyter
series Computational and Mathematical Biophysics
issn 2544-7297
publishDate 2019-08-01
description We study the discrete and discrete fractional representation of a pharmacokinetics - pharmacodynamics (PK-PD) model describing tumor growth and anti-cancer effects in continuous time considering a time scale hℕ0h$h\mathbb{N}_0^h$, where h > 0. Since the measurements of the tumor volume in mice were taken daily, we consider h = 1 and obtain the model in discrete time (i.e. daily). We then continue with fractionalizing the discrete nabla operator to obtain the model as a system of nabla fractional difference equations. The nabla fractional difference operator is considered in the sense of Riemann-Liouville definition of the fractional derivative. In order to solve the fractional discrete system analytically we state and prove some theorems in the theory of discrete fractional calculus. For the data fitting purpose, we use a new developed method which is known as an improved version of the partial sum method to estimate the parameters for discrete and discrete fractional models. Sensitivity analysis is conducted to incorporate uncertainty/noise into the model. We employ both frequentist approach and Bayesian method to construct 90 percent confidence intervals for the parameters. Lastly, for the purpose of practicality, we test the discrete models for their efficiency and illustrate their current limitations for application.
topic discrete fractional calculus
parameter estimations
data fitting
sensitivity analysis
markov chain monte carlo
random walk metropolis
delayed rejection adaptive metropolis
39a12
34a25
26a33
62g05
65c05
65c20
url https://doi.org/10.1515/cmb-2019-0002
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