Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data

Sensor technologies that measure grazing and ruminating behaviour as well as physical activities of individual cows are intended to be included in precision pasture management. One of the advantages of sensor data is they can be analysed to support farmers in many decision-making processes. This art...

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Main Authors: Abu Zar Shafiullah, Jessica Werner, Emer Kennedy, Lorenzo Leso, Bernadette O’Brien, Christina Umstätter
Format: Article
Language:English
Published: MDPI AG 2019-10-01
Series:Sensors
Subjects:
Online Access:https://www.mdpi.com/1424-8220/19/20/4479
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spelling doaj-c491216ea16c447cb7819b31eb38fd9d2020-11-25T02:01:02ZengMDPI AGSensors1424-82202019-10-011920447910.3390/s19204479s19204479Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity DataAbu Zar Shafiullah0Jessica Werner1Emer Kennedy2Lorenzo Leso3Bernadette O’Brien4Christina Umstätter5Agroscope, Tanikon 1, 8356 Ettenhausen, SwitzerlandAnimal Nutrition and Rangeland Management in the Tropics and Subtropics, University of Hohenheim, 70599 Stuttgart, GermanyTeagasc, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork P61 C996, IrelandDepartment of Agricultural, Food and Forestry Systems, University of Florence, 50145 Firenze, ItalyTeagasc, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork P61 C996, IrelandAgroscope, Tanikon 1, 8356 Ettenhausen, SwitzerlandSensor technologies that measure grazing and ruminating behaviour as well as physical activities of individual cows are intended to be included in precision pasture management. One of the advantages of sensor data is they can be analysed to support farmers in many decision-making processes. This article thus considers the performance of a set of RumiWatchSystem recorded variables in the prediction of insufficient herbage allowance for spring calving dairy cows. Several commonly used models in machine learning (ML) were applied to the binary classification problem, i.e., sufficient or insufficient herbage allowance, and the predictive performance was compared based on the classification evaluation metrics. Most of the ML models and generalised linear model (GLM) performed similarly in leave-out-one-animal (LOOA) approach to validation studies. However, cross validation (CV) studies, where a portion of features in the test and training data resulted from the same cows, revealed that support vector machine (SVM), random forest (RF) and extreme gradient boosting (XGBoost) performed relatively better than other candidate models. In general, these ML models attained 88% AUC (area under receiver operating characteristic curve) and around 80% sensitivity, specificity, accuracy, precision and F-score. This study further identified that number of rumination chews per day and grazing bites per minute were the most important predictors and examined the marginal effects of the variables on model prediction towards a decision support system.https://www.mdpi.com/1424-8220/19/20/4479machine learningbinary classificationherbage allowancefeeding behaviour and activitiesprecision pasture management
collection DOAJ
language English
format Article
sources DOAJ
author Abu Zar Shafiullah
Jessica Werner
Emer Kennedy
Lorenzo Leso
Bernadette O’Brien
Christina Umstätter
spellingShingle Abu Zar Shafiullah
Jessica Werner
Emer Kennedy
Lorenzo Leso
Bernadette O’Brien
Christina Umstätter
Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data
Sensors
machine learning
binary classification
herbage allowance
feeding behaviour and activities
precision pasture management
author_facet Abu Zar Shafiullah
Jessica Werner
Emer Kennedy
Lorenzo Leso
Bernadette O’Brien
Christina Umstätter
author_sort Abu Zar Shafiullah
title Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data
title_short Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data
title_full Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data
title_fullStr Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data
title_full_unstemmed Machine Learning Based Prediction of Insufficient Herbage Allowance with Automated Feeding Behaviour and Activity Data
title_sort machine learning based prediction of insufficient herbage allowance with automated feeding behaviour and activity data
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2019-10-01
description Sensor technologies that measure grazing and ruminating behaviour as well as physical activities of individual cows are intended to be included in precision pasture management. One of the advantages of sensor data is they can be analysed to support farmers in many decision-making processes. This article thus considers the performance of a set of RumiWatchSystem recorded variables in the prediction of insufficient herbage allowance for spring calving dairy cows. Several commonly used models in machine learning (ML) were applied to the binary classification problem, i.e., sufficient or insufficient herbage allowance, and the predictive performance was compared based on the classification evaluation metrics. Most of the ML models and generalised linear model (GLM) performed similarly in leave-out-one-animal (LOOA) approach to validation studies. However, cross validation (CV) studies, where a portion of features in the test and training data resulted from the same cows, revealed that support vector machine (SVM), random forest (RF) and extreme gradient boosting (XGBoost) performed relatively better than other candidate models. In general, these ML models attained 88% AUC (area under receiver operating characteristic curve) and around 80% sensitivity, specificity, accuracy, precision and F-score. This study further identified that number of rumination chews per day and grazing bites per minute were the most important predictors and examined the marginal effects of the variables on model prediction towards a decision support system.
topic machine learning
binary classification
herbage allowance
feeding behaviour and activities
precision pasture management
url https://www.mdpi.com/1424-8220/19/20/4479
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