A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)

Solid population studies depend on reliable capture-mark-recapture (CMR) methodology. The available methods for such studies on amphibians are often invasive, unsuitable for long-term studies, time-consuming and/or expensive. We present a new software tool, connected to a MS Access database, ManderM...

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Main Authors: Jeroen Speybroeck, Koen Steenhoudt
Format: Article
Language:English
Published: Firenze University Press 2017-03-01
Series:Acta Herpetologica
Online Access:https://oaj.fupress.net/index.php/ah/article/view/1794
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spelling doaj-c3fe1ba105cb4bd8b9f98e02d03ab2852020-11-25T02:46:24ZengFirenze University PressActa Herpetologica1827-96351827-96432017-03-0112110.13128/Acta_Herpetol-2014717102A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)Jeroen SpeybroeckKoen SteenhoudtSolid population studies depend on reliable capture-mark-recapture (CMR) methodology. The available methods for such studies on amphibians are often invasive, unsuitable for long-term studies, time-consuming and/or expensive. We present a new software tool, connected to a MS Access database, ManderMatcher, for CMR study of fire salamanders (Salamandra salamandra and related species) by means of a robust matching algorithm using 44 pattern characteristics. Metadata related to standardised counts (e.g. weather and lunar variables) as well as a myriad of individual sighting variables can be entered and saved as well. Application of the presented method to a database of 9,397 sighting records gathered over a period of eight years, as well as a random sample validation, demonstrate the accuracy of the applied matching algorithm. Differences with other methods are discussed. The program is made freely available for download and widespread application is encouraged, especially given the contemporary context of a fungal disease threatening survival of fire salamander populations. https://oaj.fupress.net/index.php/ah/article/view/1794
collection DOAJ
language English
format Article
sources DOAJ
author Jeroen Speybroeck
Koen Steenhoudt
spellingShingle Jeroen Speybroeck
Koen Steenhoudt
A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)
Acta Herpetologica
author_facet Jeroen Speybroeck
Koen Steenhoudt
author_sort Jeroen Speybroeck
title A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)
title_short A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)
title_full A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)
title_fullStr A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)
title_full_unstemmed A pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>Salamandra</em> species (Amphibia: Urodela: Salamandridae)
title_sort pattern-based tool for long-term, large-sample capture-mark-recapture studies of fire salamanders <em>salamandra</em> species (amphibia: urodela: salamandridae)
publisher Firenze University Press
series Acta Herpetologica
issn 1827-9635
1827-9643
publishDate 2017-03-01
description Solid population studies depend on reliable capture-mark-recapture (CMR) methodology. The available methods for such studies on amphibians are often invasive, unsuitable for long-term studies, time-consuming and/or expensive. We present a new software tool, connected to a MS Access database, ManderMatcher, for CMR study of fire salamanders (Salamandra salamandra and related species) by means of a robust matching algorithm using 44 pattern characteristics. Metadata related to standardised counts (e.g. weather and lunar variables) as well as a myriad of individual sighting variables can be entered and saved as well. Application of the presented method to a database of 9,397 sighting records gathered over a period of eight years, as well as a random sample validation, demonstrate the accuracy of the applied matching algorithm. Differences with other methods are discussed. The program is made freely available for download and widespread application is encouraged, especially given the contemporary context of a fungal disease threatening survival of fire salamander populations.
url https://oaj.fupress.net/index.php/ah/article/view/1794
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