An efficient optic cup segmentation method decreasing the influences of blood vessels

Abstract Background Optic cup is an important structure in ophthalmologic diagnosis such as glaucoma. Automatic optic cup segmentation is also a key issue in computer aided diagnosis based on digital fundus image. However, current methods didn’t effectively solve the problem of edge blurring caused...

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Main Authors: Chunlan Yang, Min Lu, Yanhua Duan, Bing Liu
Format: Article
Language:English
Published: BMC 2018-09-01
Series:BioMedical Engineering OnLine
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12938-018-0560-y
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spelling doaj-c22394a330644e1386567fdc1d9ad45b2020-11-25T01:36:37ZengBMCBioMedical Engineering OnLine1475-925X2018-09-0117111510.1186/s12938-018-0560-yAn efficient optic cup segmentation method decreasing the influences of blood vesselsChunlan Yang0Min Lu1Yanhua Duan2Bing Liu3College of Life Science and Bioengineering, Beijing University of TechnologyCollege of Life Science and Bioengineering, Beijing University of TechnologyCollege of Life Science and Bioengineering, Beijing University of TechnologyDepartment of Ophthalmology, Hospital of Beijing University of TechnologyAbstract Background Optic cup is an important structure in ophthalmologic diagnosis such as glaucoma. Automatic optic cup segmentation is also a key issue in computer aided diagnosis based on digital fundus image. However, current methods didn’t effectively solve the problem of edge blurring caused by blood vessels around the optic cup. Methods In this study, an improved Bertalmio–Sapiro–Caselles–Ballester (BSCB) model was proposed to eliminate the noising induced by blood vessel. First, morphological operations were performed to get the enhanced green channel image. Then blood vessels were extracted and filled by improved BSCB model. Finally, Local Chart-Vest model was used to segment the optic cup. A total of 94 samples which included 32 glaucoma fundus images and 62 normal fundus images were experimented. Results The evaluation parameters of F-score and the boundary distance achieved by the proposed method against the results from experts were 0.7955 ± 0.0724 and 11.42 ± 3.61, respectively. Average vertical optic cup-to-disc ratio values of the normal and glaucoma samples achieved by the proposed method were 0.4369 ± 0.1193 and 0.7156 ± 0.0698, which were also close to those by experts. In addition, 39 glaucoma images from the public dataset RIM-ONE were also used for methodology evaluation. Conclusions The results showed that our proposed method could overcome the influence of blood vessels in some degree and was competitive to other current optic cup segmentation algorithms. This novel methodology will be expected to use in clinic in the field of glaucoma early detection.http://link.springer.com/article/10.1186/s12938-018-0560-yOptic cupDigital fundus imageSegmentationBlood vesselBSCB model
collection DOAJ
language English
format Article
sources DOAJ
author Chunlan Yang
Min Lu
Yanhua Duan
Bing Liu
spellingShingle Chunlan Yang
Min Lu
Yanhua Duan
Bing Liu
An efficient optic cup segmentation method decreasing the influences of blood vessels
BioMedical Engineering OnLine
Optic cup
Digital fundus image
Segmentation
Blood vessel
BSCB model
author_facet Chunlan Yang
Min Lu
Yanhua Duan
Bing Liu
author_sort Chunlan Yang
title An efficient optic cup segmentation method decreasing the influences of blood vessels
title_short An efficient optic cup segmentation method decreasing the influences of blood vessels
title_full An efficient optic cup segmentation method decreasing the influences of blood vessels
title_fullStr An efficient optic cup segmentation method decreasing the influences of blood vessels
title_full_unstemmed An efficient optic cup segmentation method decreasing the influences of blood vessels
title_sort efficient optic cup segmentation method decreasing the influences of blood vessels
publisher BMC
series BioMedical Engineering OnLine
issn 1475-925X
publishDate 2018-09-01
description Abstract Background Optic cup is an important structure in ophthalmologic diagnosis such as glaucoma. Automatic optic cup segmentation is also a key issue in computer aided diagnosis based on digital fundus image. However, current methods didn’t effectively solve the problem of edge blurring caused by blood vessels around the optic cup. Methods In this study, an improved Bertalmio–Sapiro–Caselles–Ballester (BSCB) model was proposed to eliminate the noising induced by blood vessel. First, morphological operations were performed to get the enhanced green channel image. Then blood vessels were extracted and filled by improved BSCB model. Finally, Local Chart-Vest model was used to segment the optic cup. A total of 94 samples which included 32 glaucoma fundus images and 62 normal fundus images were experimented. Results The evaluation parameters of F-score and the boundary distance achieved by the proposed method against the results from experts were 0.7955 ± 0.0724 and 11.42 ± 3.61, respectively. Average vertical optic cup-to-disc ratio values of the normal and glaucoma samples achieved by the proposed method were 0.4369 ± 0.1193 and 0.7156 ± 0.0698, which were also close to those by experts. In addition, 39 glaucoma images from the public dataset RIM-ONE were also used for methodology evaluation. Conclusions The results showed that our proposed method could overcome the influence of blood vessels in some degree and was competitive to other current optic cup segmentation algorithms. This novel methodology will be expected to use in clinic in the field of glaucoma early detection.
topic Optic cup
Digital fundus image
Segmentation
Blood vessel
BSCB model
url http://link.springer.com/article/10.1186/s12938-018-0560-y
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