Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)

<b> </b>Microbial interaction with minerals are significantly linked with depositional conditions during glacial and interglacial periods, providing a unique redox condition in the sedimentary process. Abiotic geophysical and geochemical properties, including sedimentary facies, magnetic...

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Main Authors: Kee Hwan Lee, Chang Hwan Kim, Chan Hong Park, Kiho Yang, Sang Hoon Lee, In Soo Lee, You Jin Kwack, Jae Woo Kwak, Jaewoo Jung, Jinwook Kim
Format: Article
Language:English
Published: MDPI AG 2020-02-01
Series:Minerals
Subjects:
Online Access:https://www.mdpi.com/2075-163X/10/3/208
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record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Kee Hwan Lee
Chang Hwan Kim
Chan Hong Park
Kiho Yang
Sang Hoon Lee
In Soo Lee
You Jin Kwack
Jae Woo Kwak
Jaewoo Jung
Jinwook Kim
spellingShingle Kee Hwan Lee
Chang Hwan Kim
Chan Hong Park
Kiho Yang
Sang Hoon Lee
In Soo Lee
You Jin Kwack
Jae Woo Kwak
Jaewoo Jung
Jinwook Kim
Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)
Minerals
paleo-depositional conditions
mn-carbonate
marker bed
sea level change
microbial diversity
author_facet Kee Hwan Lee
Chang Hwan Kim
Chan Hong Park
Kiho Yang
Sang Hoon Lee
In Soo Lee
You Jin Kwack
Jae Woo Kwak
Jaewoo Jung
Jinwook Kim
author_sort Kee Hwan Lee
title Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)
title_short Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)
title_full Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)
title_fullStr Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)
title_full_unstemmed Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)
title_sort microbial diversity responding to changes in depositional conditions during the last glacial and interglacial period: ne ulleung basin, east sea (sea of japan)
publisher MDPI AG
series Minerals
issn 2075-163X
publishDate 2020-02-01
description <b> </b>Microbial interaction with minerals are significantly linked with depositional conditions during glacial and interglacial periods, providing a unique redox condition in the sedimentary process. Abiotic geophysical and geochemical properties, including sedimentary facies, magnetic susceptibility, grain size, clay mineralogy, and distribution of elemental compositions in the sediments, have been widely used to understand paleo-depositional environments. In this study, microbial abundance and diversity in the core sediments (6.7 m long) from the northeastern slope of Dokdo Island were adapted to characterize the conventionally defined sedimentary depositional units and conditions in light of microbial habitats. The units of interglacial (Unit 1, &lt;11.5 ka) and late glacial (Unit 2, 11.5&#8722;14.5 ka) periods in contrast to the glacial period (Unit 3, &gt;14.5 ka) were distinctively identified in the core, showing a sharp boundary marked by the laminated Mn-carbonate (CaM) mud between bioturbated (Unit 1 and 2) and laminated mud (Unit 3). Based on the marker beds and the occurrence of sedimentary facies, core sediments were divided into three units, Unit 1 (&lt;11.5 ka, interglacial), Unit 2 (11.5&#8722;14.5 ka, late glacial), and Unit 3 (&gt;14.5 ka, glacial), in descending order. The sedimentation rate (0.073 cm/year), which was three times higher than the average value for the East Sea (Sea of Japan) was measured in the late glacial period (Unit 2), indicating the settlement of suspended sediments from volcanic clay in the East Sea (Sea of Japan), including Doldo Island. The Fe and Mg-rich smectite groups in Unit 2 can be transported from volcanic sediments, such as from the volcanic island in the East Sea or the east side of Korea, while the significant appearance of the Al-rich smectite group in Unit 1 was likely transported from East China by the Tsushima Warm Current (TWC). The appearance of CaM indicates a redox condition in the sedimentary process because the formation of CaM is associated with an oxidation of Mn<sup>2+</sup> forming Mn-oxide in the ocean, and a subsequent reduction of Mn-oxide occurred, likely due to Mn-reducing bacteria resulting in the local supersaturation of Mn<sup>2+</sup> and the precipitation of CaM. The low sea level (&#8722;120 m) in the glacial period (Unit 3) may restrict water circulation, causing anoxic conditions compared to the late glacial period (Unit 2), inducing favorable redox conditions for the formation of CaM in the boundary of the two units. Indeed, <i>Planctomycetaceae</i>, including anaerobic ammonium oxidation (ANAMMOX) bacteria capable of oxidizing ammonium coupled with Mn-reduction, was identified in the CaM layer by Next Generation Sequencing (NGS). Furthermore, the appearance of aerobic bacteria, such as <i>Alphaproteobacteria</i>, <i>Gammaproteobacteria</i>, and <i>Methylophaga</i><i>,</i> tightly coupled with the abundance of phytoplankton was significantly identified in Unit 1, suggesting open marine condition in the interglacial period. Bacterial species for each unit displayed a unique grouping in the phylogenetic tree, indicating the different paleo-depositional environments favorable for the microbial habitats during the glacial and interglacial periods.
topic paleo-depositional conditions
mn-carbonate
marker bed
sea level change
microbial diversity
url https://www.mdpi.com/2075-163X/10/3/208
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spelling doaj-c0d0e53e46684a62a84a10be1f633cbe2020-11-25T00:31:47ZengMDPI AGMinerals2075-163X2020-02-0110320810.3390/min10030208min10030208Microbial Diversity Responding to Changes in Depositional Conditions during the Last Glacial and Interglacial Period: NE Ulleung Basin, East Sea (Sea of Japan)Kee Hwan Lee0Chang Hwan Kim1Chan Hong Park2Kiho Yang3Sang Hoon Lee4In Soo Lee5You Jin Kwack6Jae Woo Kwak7Jaewoo Jung8Jinwook Kim9Department of Earth System Sciences, Yonsei University, Seoul 03722, KoreaEast Sea Research Institute, Korea Institute of Ocean Science and Technology (KIOST), Uljin 36315, KoreaEast Sea Research Institute, Korea Institute of Ocean Science and Technology (KIOST), Uljin 36315, KoreaDepartment of Oceanography, Pusan National University, Busan 46241, KoreaMarine Active Fault Research Center, Korea Institute of Ocean Science and Technology (KIOST), Busan 49111, KoreaDepartment of Biological Science and Biotechnology, Hannam University, Daejeon 34054, KoreaDepartment of Biological Science and Biotechnology, Hannam University, Daejeon 34054, KoreaDepartment of Biological Science and Biotechnology, Hannam University, Daejeon 34054, KoreaDivision of Polar Paleoenvironment, Korea Polar Research Institute (KOPRI), Incheon 21990, KoreaDepartment of Earth System Sciences, Yonsei University, Seoul 03722, Korea<b> </b>Microbial interaction with minerals are significantly linked with depositional conditions during glacial and interglacial periods, providing a unique redox condition in the sedimentary process. Abiotic geophysical and geochemical properties, including sedimentary facies, magnetic susceptibility, grain size, clay mineralogy, and distribution of elemental compositions in the sediments, have been widely used to understand paleo-depositional environments. In this study, microbial abundance and diversity in the core sediments (6.7 m long) from the northeastern slope of Dokdo Island were adapted to characterize the conventionally defined sedimentary depositional units and conditions in light of microbial habitats. The units of interglacial (Unit 1, &lt;11.5 ka) and late glacial (Unit 2, 11.5&#8722;14.5 ka) periods in contrast to the glacial period (Unit 3, &gt;14.5 ka) were distinctively identified in the core, showing a sharp boundary marked by the laminated Mn-carbonate (CaM) mud between bioturbated (Unit 1 and 2) and laminated mud (Unit 3). Based on the marker beds and the occurrence of sedimentary facies, core sediments were divided into three units, Unit 1 (&lt;11.5 ka, interglacial), Unit 2 (11.5&#8722;14.5 ka, late glacial), and Unit 3 (&gt;14.5 ka, glacial), in descending order. The sedimentation rate (0.073 cm/year), which was three times higher than the average value for the East Sea (Sea of Japan) was measured in the late glacial period (Unit 2), indicating the settlement of suspended sediments from volcanic clay in the East Sea (Sea of Japan), including Doldo Island. The Fe and Mg-rich smectite groups in Unit 2 can be transported from volcanic sediments, such as from the volcanic island in the East Sea or the east side of Korea, while the significant appearance of the Al-rich smectite group in Unit 1 was likely transported from East China by the Tsushima Warm Current (TWC). The appearance of CaM indicates a redox condition in the sedimentary process because the formation of CaM is associated with an oxidation of Mn<sup>2+</sup> forming Mn-oxide in the ocean, and a subsequent reduction of Mn-oxide occurred, likely due to Mn-reducing bacteria resulting in the local supersaturation of Mn<sup>2+</sup> and the precipitation of CaM. The low sea level (&#8722;120 m) in the glacial period (Unit 3) may restrict water circulation, causing anoxic conditions compared to the late glacial period (Unit 2), inducing favorable redox conditions for the formation of CaM in the boundary of the two units. Indeed, <i>Planctomycetaceae</i>, including anaerobic ammonium oxidation (ANAMMOX) bacteria capable of oxidizing ammonium coupled with Mn-reduction, was identified in the CaM layer by Next Generation Sequencing (NGS). Furthermore, the appearance of aerobic bacteria, such as <i>Alphaproteobacteria</i>, <i>Gammaproteobacteria</i>, and <i>Methylophaga</i><i>,</i> tightly coupled with the abundance of phytoplankton was significantly identified in Unit 1, suggesting open marine condition in the interglacial period. Bacterial species for each unit displayed a unique grouping in the phylogenetic tree, indicating the different paleo-depositional environments favorable for the microbial habitats during the glacial and interglacial periods.https://www.mdpi.com/2075-163X/10/3/208paleo-depositional conditionsmn-carbonatemarker bedsea level changemicrobial diversity